Sequence 1: | NP_612047.1 | Gene: | Rev1 / 38079 | FlyBaseID: | FBgn0035150 | Length: | 995 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101674.1 | Gene: | Polh / 316235 | RGDID: | 1309893 | Length: | 689 | Species: | Rattus norvegicus |
Alignment Length: | 734 | Identity: | 153/734 - (20%) |
---|---|---|---|
Similarity: | 252/734 - (34%) | Gaps: | 244/734 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 278 IDMDCFFVSVGLRTRPELRGLPIAVTHS---KGGNAATDVPVHPQADRKAELELFAQRFEHHFHD 339
Fly 340 GDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTIPY-------DFEGY 397
Fly 398 KEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHE---------LNVDVM-------------- 439
Fly 440 -------------------------------------AFVSHLRQEVYSKTGCPCSAGVAGNKLL 467
Fly 468 ARMATKEAKPNGQFLLD--SSNDILAYMAPMSLDLLPG-VGSSISHKLKQAGLNNCGDVQNTTLE 529
Fly 530 KMEKVLGKKLGQNLFQNCRGIDDRPLAYEQIRKTVSAEMNF--GIRFTNSVECEQFLCQLSEEVT 592
Fly 593 KRLVEIR----RKARSINLKIMVR------AAEAPVETSKYMGHGV----------CDIINKSSL 637
Fly 638 ---------------IKYATDDVNVITTVVLDLMKDADIPPD-ELRGLGIHLTRLEDANEVRKE- 685
Fly 686 -NNIKEMF---GKMSEMRKDKPIPQGAVGDKSIGDDKVNKP-LVFENKPKPREPRNVLSMLTAAA 745
Fly 746 VSRKSVT---EDRSQRGTSKPITRPLSLVPKLDEDVLAQLPEDIRLEVIANREEHLCIAEYDGYR 807
Fly 808 SPQYPTLRSPPLLNPYVTTNVSPLKATDL----KPSTSRAAVARLQKRKERKEQEHYIRSDQIVA 868
Fly 869 DYID------DLPDFVNPH 881 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rev1 | NP_612047.1 | BRCT_Rev1 | 39..121 | CDD:349351 | |
PolY_Rev1 | 218..676 | CDD:176455 | 109/508 (21%) | ||
Rev1_C | 890..985 | CDD:213388 | |||
Polh | NP_001101674.1 | DinP | 8..>325 | CDD:223466 | 86/365 (24%) |
PolY_Pol_eta | 10..427 | CDD:176456 | 103/470 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0389 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |