Sequence 1: | NP_612047.1 | Gene: | Rev1 / 38079 | FlyBaseID: | FBgn0035150 | Length: | 995 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001122692.1 | Gene: | polk-1 / 176209 | WormBaseID: | WBGene00017696 | Length: | 596 | Species: | Caenorhabditis elegans |
Alignment Length: | 607 | Identity: | 132/607 - (21%) |
---|---|---|---|
Similarity: | 227/607 - (37%) | Gaps: | 211/607 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 271 LERYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFEH 335
Fly 336 HFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGM--FVGQALKLCPELKTIPYDFEGYK 398
Fly 399 EVAFTLYDTVAQYTLNIEAVSCDEMFVELTDL--------------------------------- 430
Fly 431 ---------------AHELNVDVMAF-------VSHLRQEVYSKTGCPCSAGVAGNKLLARMATK 473
Fly 474 EAKPNGQFLLDS-SNDILAYMAPMSLDLLPGVGSSISHKLKQAGLNNCGDVQNTTLEKMEKVLGK 537
Fly 538 KLGQNLFQNC-------------RGIDDRPLAYEQIRKTVSAEMNFG--IRFTNSVECEQFLCQL 587
Fly 588 SEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGHGVCDIINKS---SLIKYATDDVNVIT 649
Fly 650 TVVLDLMKDADIPPDELRGLGIHLTRL---EDANEVRKENNIKEMFGKMSEMRKDKPIPQGAVGD 711
Fly 712 KSIGDDKVNKPLVFENKPKP---REPRNVLSM-------------------LTAAAVSRKSVTED 754
Fly 755 RSQRGTSKPITRPLSLVPKLDE 776 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rev1 | NP_612047.1 | BRCT_Rev1 | 39..121 | CDD:349351 | |
PolY_Rev1 | 218..676 | CDD:176455 | 103/480 (21%) | ||
Rev1_C | 890..985 | CDD:213388 | |||
polk-1 | NP_001122692.1 | PolY_Pol_IV_kappa | 86..473 | CDD:176459 | 101/475 (21%) |
PRK02406 | 90..473 | CDD:235035 | 99/471 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |