DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rev1 and PolI

DIOPT Version :10

Sequence 1:NP_612047.1 Gene:Rev1 / 38079 FlyBaseID:FBgn0035150 Length:995 Species:Drosophila melanogaster
Sequence 2:XP_312847.6 Gene:PolI / 1273828 VectorBaseID:AGAMI1_005168 Length:807 Species:Anopheles gambiae


Alignment Length:706 Identity:143/706 - (20%)
Similarity:232/706 - (32%) Gaps:257/706 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 RYVMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFEHHF 337
            |.::|||||.::..|.....|.|:..|.||                           .|||    
Mosquito    16 RVIIHIDMDYYYAQVEEVLNPSLKDKPFAV---------------------------KQRF---- 49

  Fly   338 HDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTI-PYDFEGYKEVA 401
                                .:.:.:|.||||||:....|.:||..||||..: ..|...||.::
Mosquito    50 --------------------CVVTSNYIAREKGIKKLQPVKEALAACPELVLLNGEDITKYKAMS 94

  Fly   402 FTLYDTVAQYTLNIEAVSCDEMFVELTDLAHE--------------LNVD-VMAFV--------- 442
            ..:.:.:.::|.::|.:..||.::::|:|..|              ..:| |..|:         
Mosquito    95 VRINEIMHRFTPHVEKLGLDENYLDVTELIAERLEQLEGAGDSAALAKLDFVQGFIHPPRTDESS 159

  Fly   443 ------------------------------SHLRQE----VYSKTGCPCSAGVAGNKLLARMATK 473
                                          :||.||    ::.:.|..|.||:|.|||||::...
Mosquito   160 ALDPPSHRETDRDLFRRCCCCGCDRRLILATHLAQEIRDSIFQELGLRCCAGIAHNKLLAKLVGA 224

  Fly   474 EAKPNGQFLLDSSNDILAYMAPM-SLDLLPGVGSSISHKLKQA-GLNNCGDVQNTTLEKMEKVLG 536
            ..|.|.|.:|..:: ..|::|.: |:..|.|:|...:..|..: |::...|:|...|:::.|.||
Mosquito   225 VHKQNKQTVLLPTH-ATAFVASLGSVRSLTGIGEKTAQTLADSCGISTVTDLQCIELDRLTKHLG 288

  Fly   537 KKLGQNLFQNCRGIDDRPLAYEQIRKTVSAEMNFGIRFTNSVECEQFLCQLSEEVTKRLVEIRRK 601
            .:....|.|...|.||..:......|:|..|.:          |..             :.:|..
Mosquito   289 YEQAVRLKQLALGRDDTVVRPTGKPKSVGLEDS----------CPS-------------ISVRAD 330

  Fly   602 ARSINLKIMVRAAEAPVETSKYMGHGVCDIINKSSLIKYATDDVNV-----ITTVVLDL------ 655
            |......::||                        |:|...||..|     :|....||      
Mosquito   331 AEDKFRHLLVR------------------------LVKNIADDGRVPIAIKVTVRKYDLAKRTTH 371

  Fly   656 --MKDADIPPDELRGLGIHLTRLEDANEVRKENNIKEMFGKMSEMRKDKPI----------PQGA 708
              .|...:.|...|.:|..|. |.|..:.:....:.::|.:|.::|:...|          .:..
Mosquito   372 RESKQDKLLPSMFRHVGGRLV-LADGAQEKILTIVMKVFERMVDLRQPFNITLLGLSFFKFQERR 435

  Fly   709 VGDKSIGDDKVNKPLV--------------------FENK------------------------- 728
            :|.|||.:..:.|..:                    ..||                         
Mosquito   436 IGSKSIANFLIKKSDIEVQSITNLSNESITLSDISFCSNKSALSLSAMDCEPCCSSDAGSVASLS 500

  Fly   729 -------PKPREPRNVLSMLTAAAVSRKSVTEDRSQRGTSKPITRPLSLVPKLDEDVLAQL-PED 785
                   |.|::.|.:|    .....|.:.|:|| ..|.|:|           ||..|::| ..|
Mosquito   501 GSESDAEPSPKKSRRLL----FCQGRRPASTQDR-HYGNSEP-----------DETTLSKLRVAD 549

  Fly   786 IRLEVIANREEHLCIAEYDGYRSPQYPTLRSPPLLNPYVTTNVSPLKATDLKPSTS 841
            :||    |.:|....|...|..:.......||....|...:..|...||.....||
Mosquito   550 LRL----NSKEFDQDAHPSGGTTAVAAASSSPSSGAPMDVSTTSSTAATTAAKQTS 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rev1NP_612047.1 BRCT_Rev1 39..121 CDD:349351
PolY_Rev1 218..676 CDD:176455 100/476 (21%)
Rev1_C 890..985 CDD:213388
PolIXP_312847.6 None
Blue background indicates that the domain is not in the aligned region.

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