DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED30 and MED30

DIOPT Version :10

Sequence 1:NP_612046.1 Gene:MED30 / 38078 FlyBaseID:FBgn0035149 Length:318 Species:Drosophila melanogaster
Sequence 2:NP_542382.1 Gene:MED30 / 90390 HGNCID:23032 Length:178 Species:Homo sapiens


Alignment Length:242 Identity:40/242 - (16%)
Similarity:87/242 - (35%) Gaps:76/242 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   549 GVQETGH---RLARYCQRHNVPFEY-----NAIAQKWETIQVEDLKLRQGEYVV----------- 594
            ||.||.:   |:....:..|:.:.|     ||:      ..:.|.:.||.|::.           
Human    33 GVLETTYGSLRVLNIERNGNIIYTYKDNKGNAV------FGLYDCQTRQNEHLYTFEKDMQAVSC 91

  Fly   595 -VNSLFRFRNLLDETVLVNS--------------PRDAVLKLIRKINP--NVFIPAILSGNYNAP 642
             |||        :.|||..|              |....|.|:.:|:|  ||             
Human    92 SVNS--------ERTVLAASFIQYTTEGVKNDLQPGSKCLTLLVEIHPVNNV------------- 135

  Fly   643 FFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEG------------TE 695
             .|.:..::......::...:|.|..::.:.|:.|:::..|..:.:...:|            .:
Human   136 -KVLKAVDSCVWVQFLYPQAESHLLPQNHLLLISEEKYIERFHIQITREDGDRVVIRNSSHLPRD 199

  Fly   696 RVERPETYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDV 742
            |:.....:.||.....|..:.:|...:.:::.::.:.:..::..|::
Human   200 RLAEDFVWAQWDLSEQRLYYIELKESRSILKCIQFRADESFNLMFEM 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED30NP_612046.1 Med30 178..315 CDD:463259
MED30NP_542382.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Med30 29..176 CDD:463259 33/178 (19%)
Blue background indicates that the domain is not in the aligned region.

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