Protein Alignment MED30 and med30

DIOPT Version :9

• Sequence 1: NP_612046.1
• Gene: MED30 / 38078
• FlyBaseID: FBgn0035149
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: NP_001017241.1
• Gene: med30 / 549995
• XenbaseID: XB-GENE-1008112
• Length: 184
• Species: Xenopus tropicalis
• Alignment Length: 179
• Identity: 64/179 - (35%)
• Similarity: 104/179 - (58%)
• Gaps: 12/179 - (6%)

  Fly   150 PVAGIPPGGAGGSNNMLAISQQNPHKEINIVQLSRLGQETVQDIASRFQEVFASLKGIQ----PT 210
            |::|...|.|.|.............:|:|...|.|:||||||||..|..|:|..|:.:|    .|
 Frog     5 PLSGPGMGAAAGPGGFPGAQAATAAREVNTASLCRIGQETVQDIVFRTMEIFQLLRNMQLPNGVT 69

  Fly   211 SHRENSSEK--KVQEYFRTIRLLFKRVRIIYEKCND--AGMDYMSAESLIPY-RDEPEPRIEPSL 270
            .|.....::  |:||:.|.:.:||:::|::|:|||:  ||:|.:..|.|:|| .:|.....:..:
 Frog    70 YHTVTYQDRLGKLQEHLRQLSILFRKLRLVYDKCNENCAGLDPVPIEQLVPYVEEEYSKHDDRGI 134

  Fly   271 CDEYRKVLQENHELIET---VKLKNRQLREIIDRTRIIIWEINTMLAMR 316
            ..:.|...:|..|::|.   :|.||:||::|:|:.|.:||:||:|||||
 Frog   135 ASQLRFASEEKREILEVNKKLKQKNQQLKQIMDQLRNLIWDINSMLAMR 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED30	NP_612046.1	Med30	178..315	CDD:288208	55/148 (37%)
med30	NP_001017241.1	Med30	33..182	CDD:371462	55/148 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	102	1.000	Domainoid score	I6744
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H12329
Inparanoid	1	1.050	114	1.000	Inparanoid score	I4700
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1549016at2759
OrthoFinder	1	1.000	-	-		FOG0006305
OrthoInspector	1	1.000	-	-		oto102367
Panther	1	1.100	-	-	LDO	PTHR31705
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R4651
SonicParanoid	1	1.000	-	-		X4589
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	12	12.100