Protein Alignment MED30 and Med30

DIOPT Version :9

• Sequence 1: NP_612046.1
• Gene: MED30 / 38078
• FlyBaseID: FBgn0035149
• Length: 318
• Species: Drosophila melanogaster
• Sequence 2: XP_006241708.1
• Gene: Med30 / 299905
• RGDID: 1309369
• Length: 178
• Species: Rattus norvegicus
• Alignment Length: 183
• Identity: 69/183 - (37%)
• Similarity: 105/183 - (57%)
• Gaps: 26/183 - (14%)

  Fly   150 PVA--GIPPGGAGGSNNMLAISQQNPHKEINIVQLSRLGQETVQDIASRFQEVFASLKGIQ---- 208
            |:|  |:..|..||.      ..|...:|:|...|.|:||||||||..|..|:|..|:.:|
  Rat     5 PLAPTGMASGPFGGP------QAQQAAREVNTATLCRIGQETVQDIVYRTMEIFQLLRNMQLPNG 63

  Fly   209 PTSHRENSSEK--KVQEYFRTIRLLFKRVRIIYEKCND--AGMDYMSAESLIPYRDEP----EPR 265
            .|.|.....::  |:|::.|.:.:||:::|::|:|||:  .|||.:..|.||||.||.    :.|
  Rat    64 VTYHTGTYQDRLTKLQDHLRQLSILFRKLRLVYDKCNENCGGMDPIPVEQLIPYVDEDGSKNDDR 128

  Fly   266 IEPS--LCDEYRKVLQENHELIETVKLKNRQLREIIDRTRIIIWEINTMLAMR 316
            ..|.  ..:|.|::.:.|.:|    |.||:||::|:|:.|.:||:||.|||||
  Rat   129 AGPPRFASEERREIAEVNKKL----KQKNQQLKQIMDQLRNLIWDINAMLAMR 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED30	NP_612046.1	Med30	178..315	CDD:288208	58/150 (39%)
Med30	XP_006241708.1	Med30	29..176	CDD:402766	58/150 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166335042
Domainoid	1	1.000	100	1.000	Domainoid score	I6865
eggNOG	1	0.900	-	-		E1_28NHU
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H12329
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1549016at2759
OrthoFinder	1	1.000	-	-		FOG0006305
OrthoInspector	1	1.000	-	-		oto95630
orthoMCL	1	0.900	-	-		OOG6_108111
Panther	1	1.100	-	-	LDO	PTHR31705
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X4589
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	12.750