DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3402 and Pdzrn3

DIOPT Version :10

Sequence 1:NP_612045.1 Gene:CG3402 / 38077 FlyBaseID:FBgn0035148 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_061372.2 Gene:Pdzrn3 / 55983 MGIID:1933157 Length:1063 Species:Mus musculus


Alignment Length:114 Identity:37/114 - (32%)
Similarity:59/114 - (51%) Gaps:22/114 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GTAMECLSIPITLHKEKDYDQEGREILKCGFKIGGG---ID-QDYKKSPQGYTDYGIYVTEVHEG 71
            |...|..|:.:.||::..         ..||.|.||   :| ||      |.:..||:|:::.:.
Mouse   240 GKGEETKSLTLVLHRDSG---------SLGFNIIGGRPCVDNQD------GSSSEGIFVSKIVDS 289

  Fly    72 SPAAR-AGLRIHDKILQCNGYDFTMVTHKKAVSYIR--KNPILNMLVAR 117
            .|||: .||:|||:|::.||.|.:..||.:||...:  |.||:..::.|
Mouse   290 GPAAKEGGLQIHDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRR 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3402NP_612045.1 PDZ_TAX1BP3-like 20..117 CDD:467265 33/103 (32%)
Pdzrn3NP_061372.2 RING-HC_LNX3 12..58 CDD:438378
Sina 69..>132 CDD:460824
PDZ1-PDZRN4-like 246..337 CDD:467199 34/105 (32%)
PDZ2-PDZRN4-like 420..503 CDD:467200
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 545..602
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 746..798
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 834..853
Blue background indicates that the domain is not in the aligned region.

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