DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3402 and Sdcbp2

DIOPT Version :9

Sequence 1:NP_612045.1 Gene:CG3402 / 38077 FlyBaseID:FBgn0035148 Length:123 Species:Drosophila melanogaster
Sequence 2:NP_663510.1 Gene:Sdcbp2 / 228765 MGIID:2385156 Length:292 Species:Mus musculus


Alignment Length:104 Identity:31/104 - (29%)
Similarity:39/104 - (37%) Gaps:32/104 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 REILKCGFKIGGGIDQDYKKSPQGYT-------DYGIYVTEVHEGSPAARAGLRIHDKILQCNGY 91
            |||..|             |..:|.|       |.|::|..|...:||:..|||..|:|||.:|.
Mouse   107 REIHLC-------------KDERGKTGLRLQAVDKGLFVQLVQANTPASLVGLRFGDQILQIDGC 158

  Fly    92 DF----TMVTHK--------KAVSYIRKNPILNMLVARK 118
            |.    |...||        |.|..||..|....:...|
Mouse   159 DCAGWNTHKAHKVLKKASAEKIVMVIRDRPFQRTVTMHK 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3402NP_612045.1 PDZ_signaling 21..116 CDD:238492 30/100 (30%)
Sdcbp2NP_663510.1 PDZ 117..185 CDD:238080 22/67 (33%)
PDZ_signaling 191..264 CDD:238492 1/7 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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