DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gale and RHD1

DIOPT Version :9

Sequence 1:NP_001246537.1 Gene:Gale / 38076 FlyBaseID:FBgn0035147 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_176625.1 Gene:RHD1 / 842752 AraportID:AT1G64440 Length:348 Species:Arabidopsis thaliana


Alignment Length:347 Identity:189/347 - (54%)
Similarity:237/347 - (68%) Gaps:11/347 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEIT---GKKVNFYRVD 67
            :|||||||||||||||::|..|||.:.:|||.|:..      .::.||:::.   |:.:..::||
plant     5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSL------VSIQRVKDLAGDHGQNLTVHQVD 63

  Fly    68 ITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKFVYSS 132
            :.|:..:..||.|.|.|.|.|||.|||||||...||.||:||:..|..|||.||.:...|.|:||
plant    64 LRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKKLVFSS 128

  Fly   133 SATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFNPVGAHISGR 197
            ||||||.||.:|.|||.|... .||||:||.|.|:|.:|:.:.|..|.::.||||||||||.|||
plant   129 SATVYGWPKEVPCTEESPLSG-MSPYGRTKLFIEDICRDVQRGDPEWRIIMLRYFNPVGAHPSGR 192

  Fly   198 IGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNI 262
            |||||.|.|||||||:.||.|||.|:|.:||:|:.|.||||||||||:||||:||:.||.||.: 
plant   193 IGEDPCGTPNNLMPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHVVDLADGHICALQKLDD- 256

  Fly   263 AETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAER 327
            .|.|...||||||.|.:||:||.|||||||.|:....|.||.||..|.||....|:::|.|||..
plant   257 TEIGCEVYNLGTGKGTTVLEMVDAFEKASGMKIPLVKVGRRPGDAETVYASTEKAERELNWKANF 321

  Fly   328 GIDKMCEDTWRWQSQNPNGYAN 349
            ||::||.|.|.|.|.||.||.:
plant   322 GIEEMCRDQWNWASNNPFGYGS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaleNP_001246537.1 UDP_G4E_1_SDR_e 5..341 CDD:187558 184/337 (55%)
galE 6..343 CDD:273487 185/339 (55%)
RHD1NP_176625.1 PLN02240 1..348 CDD:177883 189/347 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 362 1.000 Domainoid score I192
eggNOG 1 0.900 - - E1_COG1087
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H347
Inparanoid 1 1.050 383 1.000 Inparanoid score I523
OMA 1 1.010 - - QHG54544
OrthoDB 1 1.010 - - D662484at2759
OrthoFinder 1 1.000 - - FOG0001696
OrthoInspector 1 1.000 - - otm2458
orthoMCL 1 0.900 - - OOG6_100506
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1246
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.740

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