DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gale and gale-1

DIOPT Version :9

Sequence 1:NP_001246537.1 Gene:Gale / 38076 FlyBaseID:FBgn0035147 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001021052.1 Gene:gale-1 / 173171 WormBaseID:WBGene00008132 Length:349 Species:Caenorhabditis elegans


Alignment Length:346 Identity:192/346 - (55%)
Similarity:246/346 - (71%) Gaps:3/346 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALS--RVQEITGKKVNFYRVDI 68
            :||||.||:||||||||:||:||.|:|:||..||.|...:...|:|  ||.::|||.|.|..||:
 Worm     3 ILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVPFQNVDV 67

  Fly    69 TDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNNVFKFVYSSS 133
            .|...:..||.|:|.|.:.|.|||||||||...|||||.||:..:..|::.....||..||:|||
 Worm    68 CDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKYNVKNFVFSSS 132

  Fly   134 ATVYGEPKFLPVTEEHPTG-NCTSPYGKTKYFTEEILKDLCKSDKRWAVVSLRYFNPVGAHISGR 197
            |||||.|..||:||:..|| ..|:|||:|||..|:||.|:.|::..|.||.||||||||||.||.
 Worm   133 ATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNVVLLRYFNPVGAHKSGL 197

  Fly   198 IGEDPNGEPNNLMPYIAQVAVGRRPSLSVYGSDFPTHDGTGVRDYIHIVDLAEGHVKALDKLRNI 262
            |||||.|.|||||||::|||:|:.|.|::||..|.|.||||||||||:||||:|||||.|:::.:
 Worm   198 IGEDPKGVPNNLMPYVSQVAIGKLPVLTIYGDQFDTVDGTGVRDYIHVVDLAKGHVKAFDRIKTV 262

  Fly   263 AETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNYTLVDRRSGDVATCYADATLADKKLGWKAER 327
            ...|...|||||||||||..||.|.:|.||:.:...:...|.||||:.|.|.:||.:||||:||.
 Worm   263 GNIGTEIYNLGTGVGYSVRQMVDALKKVSGRDIPVKIGVPRPGDVASVYCDPSLAQEKLGWRAET 327

  Fly   328 GIDKMCEDTWRWQSQNPNGYA 348
            |:::||.|.|.||::||.|::
 Worm   328 GLEEMCADLWNWQTKNPQGFS 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GaleNP_001246537.1 UDP_G4E_1_SDR_e 5..341 CDD:187558 188/337 (56%)
galE 6..343 CDD:273487 189/339 (56%)
gale-1NP_001021052.1 UDP_G4E_1_SDR_e 2..341 CDD:187558 188/337 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 373 1.000 Domainoid score I472
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H347
Inparanoid 1 1.050 394 1.000 Inparanoid score I1126
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54544
OrthoDB 1 1.010 - - D386435at33208
OrthoFinder 1 1.000 - - FOG0001696
OrthoInspector 1 1.000 - - oto17930
orthoMCL 1 0.900 - - OOG6_100506
Panther 1 1.100 - - LDO PTHR43725
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1854
SonicParanoid 1 1.000 - - X1246
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1313.010

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