DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg-2 and Hdhd3

DIOPT Version :9

Sequence 1:NP_612043.1 Gene:Reg-2 / 38075 FlyBaseID:FBgn0016715 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_077219.1 Gene:Hdhd3 / 72748 MGIID:1919998 Length:251 Species:Mus musculus


Alignment Length:242 Identity:68/242 - (28%)
Similarity:125/242 - (51%) Gaps:14/242 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQ 70
            :.||:|:||.:||::.|...|::|.......|...::..:.:.|:..:...:.::||:|....  
Mouse     6 QMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRG-- 68

  Fly    71 MEWQQWWRKLIAGTFAESGAAIPD-EKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPE 134
            :..:|||:.::..||..:|  :|| :.:...::.|.|.:.:...||...|:...|:..||    .
Mouse    69 LTSRQWWKDVVLHTFRLAG--VPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRK----R 127

  Fly   135 KCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLH 199
            ..||.|::|||.||..:|....|.::.||.:.|..|...||||:||::|::::   .::|....|
Mouse   128 GLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRA---CVEPAVAAH 189

  Fly   200 IGDGPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSL 246
            :||....||..::.:|.||.||  .....|.....:.:.::|:.|||
Mouse   190 VGDSYLCDYQGSQAVGMHSFLV--AGSEPLDSAVRDSVPKEHILPSL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg-2NP_612043.1 DREG-2 8..220 CDD:274056 61/212 (29%)
HAD_like 76..215 CDD:304363 42/139 (30%)
Hdhd3NP_077219.1 DREG-2 8..210 CDD:274056 61/212 (29%)
HAD_like 102..211 CDD:119389 37/115 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833524
Domainoid 1 1.000 66 1.000 Domainoid score I9969
eggNOG 1 0.900 - - E1_COG1011
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 124 1.000 Inparanoid score I4690
Isobase 1 0.950 - 0 Normalized mean entropy S2956
OMA 1 1.010 - - QHG55252
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002375
OrthoInspector 1 1.000 - - otm42958
orthoMCL 1 0.900 - - OOG6_102573
Panther 1 1.100 - - LDO PTHR46191
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1833
SonicParanoid 1 1.000 - - X2471
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.740

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