DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg-2 and Hdhd3

DIOPT Version :10

Sequence 1:NP_612043.1 Gene:Reg-2 / 38075 FlyBaseID:FBgn0016715 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_077219.1 Gene:Hdhd3 / 72748 MGIID:1919998 Length:251 Species:Mus musculus


Alignment Length:242 Identity:68/242 - (28%)
Similarity:125/242 - (51%) Gaps:14/242 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQ 70
            :.||:|:||.:||::.|...|::|.......|...::..:.:.|:..:...:.::||:|....  
Mouse     6 QMRLLTWDVKDTLIKLRRPVGEEYASKARAHGVVVEDITVEQAFRQAYRAQSHNFPNYGLSRG-- 68

  Fly    71 MEWQQWWRKLIAGTFAESGAAIPD-EKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPE 134
            :..:|||:.::..||..:|  :|| :.:...::.|.|.:.:...||...|:...|:..||    .
Mouse    69 LTSRQWWKDVVLHTFRLAG--VPDAQAMTPVADQLYEDFSSPFTWQVLEGAEMTLKGCRK----R 127

  Fly   135 KCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLH 199
            ..||.|::|||.||..:|....|.::.||.:.|..|...||||:||::|::::   .::|....|
Mouse   128 GLKLAVVSNFDRRLEDILTGLGLREHFDFVLTSEAVGCPKPDPRIFREALQRA---CVEPAVAAH 189

  Fly   200 IGDGPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSL 246
            :||....||..::.:|.||.||  .....|.....:.:.::|:.|||
Mouse   190 VGDSYLCDYQGSQAVGMHSFLV--AGSEPLDSAVRDSVPKEHILPSL 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg-2NP_612043.1 DREG-2 8..220 CDD:274056 61/212 (29%)
Hdhd3NP_077219.1 DREG-2 8..210 CDD:274056 61/212 (29%)

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