DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg-2 and hdhd3

DIOPT Version :9

Sequence 1:NP_612043.1 Gene:Reg-2 / 38075 FlyBaseID:FBgn0016715 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001038732.2 Gene:hdhd3 / 553464 ZFINID:ZDB-GENE-040724-118 Length:242 Species:Danio rerio


Alignment Length:239 Identity:69/239 - (28%)
Similarity:113/239 - (47%) Gaps:14/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQME 72
            |.:.:||.:|||:.|.:.|:||.......|.:....::...|:..:.:.::..||:||...  |:
Zfish     6 RWVLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSPAQVETAFRLAYKQKSQLLPNYGRAQG--MD 68

  Fly    73 WQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPEKCK 137
            .|.||..|:..||.:.|...| ..|...:|:|...:.....|:..:.|...|    |.......|
Zfish    69 SQVWWTGLVRDTFGQCGVHDP-ALLDKLANNLYHNFCGPENWEVFSDSNSTL----KSCTALGLK 128

  Fly   138 LGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLHIGD 202
            .||::|||.||..:|:...|..:..|.:.|.:.:..||||.||.:|:|:.|   :.....:|:||
Zfish   129 QGVVSNFDRRLEGILRGCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCG---VPASSVVHVGD 190

  Fly   203 GPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSL 246
            ....|||.::.||....|::.|.    .:|...||..:|:..||
Zfish   191 HYVKDYLTSRSLGIRGYLLNRKD----GQKTHLDIPPEHILQSL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg-2NP_612043.1 DREG-2 8..220 CDD:274056 61/211 (29%)
HAD_like 76..215 CDD:304363 41/138 (30%)
hdhd3NP_001038732.2 DREG-2 6..208 CDD:274056 61/211 (29%)
HAD_like <147..233 CDD:304363 28/91 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576222
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1011
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 110 1.000 Inparanoid score I4868
OMA 1 1.010 - - QHG55252
OrthoDB 1 1.010 - - D1119971at2759
OrthoFinder 1 1.000 - - FOG0002375
OrthoInspector 1 1.000 - - otm26628
orthoMCL 1 0.900 - - OOG6_102573
Panther 1 1.100 - - LDO PTHR46191
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1833
SonicParanoid 1 1.000 - - X2471
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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