DRSC/TRiP Functional Genomics Resources

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Protein Alignment Reg-2 and hdhd3

DIOPT Version :10

Sequence 1:NP_612043.1 Gene:Reg-2 / 38075 FlyBaseID:FBgn0016715 Length:260 Species:Drosophila melanogaster
Sequence 2:NP_001038732.2 Gene:hdhd3 / 553464 ZFINID:ZDB-GENE-040724-118 Length:242 Species:Danio rerio


Alignment Length:239 Identity:69/239 - (28%)
Similarity:113/239 - (47%) Gaps:14/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQME 72
            |.:.:||.:|||:.|.:.|:||.......|.:....::...|:..:.:.::..||:||...  |:
Zfish     6 RWVLWDVKDTLLKVRRSVGEQYCREAQQAGLQLSPAQVETAFRLAYKQKSQLLPNYGRAQG--MD 68

  Fly    73 WQQWWRKLIAGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKELKPEKCK 137
            .|.||..|:..||.:.|...| ..|...:|:|...:.....|:..:.|...|    |.......|
Zfish    69 SQVWWTGLVRDTFGQCGVHDP-ALLDKLANNLYHNFCGPENWEVFSDSNSTL----KSCTALGLK 128

  Fly   138 LGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLHIGD 202
            .||::|||.||..:|:...|..:..|.:.|.:.:..||||.||.:|:|:.|   :.....:|:||
Zfish   129 QGVVSNFDRRLEGILRGCGLLTHFSFIVTSEDARVAKPDPAIFSQALERCG---VPASSVVHVGD 190

  Fly   203 GPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSL 246
            ....|||.::.||....|::.|.    .:|...||..:|:..||
Zfish   191 HYVKDYLTSRSLGIRGYLLNRKD----GQKTHLDIPPEHILQSL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Reg-2NP_612043.1 DREG-2 8..220 CDD:274056 61/211 (29%)
hdhd3NP_001038732.2 DREG-2 6..208 CDD:274056 61/211 (29%)

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