DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and PATL1

DIOPT Version :10

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_177360.1 Gene:PATL1 / 843546 AraportID:AT1G72150 Length:573 Species:Arabidopsis thaliana


Alignment Length:363 Identity:76/363 - (20%)
Similarity:138/363 - (38%) Gaps:66/363 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DYFLVRWLRARKWNLEAAEKMLRASLKTRAMWNVDNIEKWDPPKALQEYLPYGLMGYDNEGSPVL 97
            |..|.::||||.:.::.|..||:.:::.|....:|.:.:.....:..|.:.:. .|.|.||..|:
plant   256 DVILTKFLRARDFKVKEALTMLKNT
VQWRKENKIDELVESGEEVSEFEKMVFA-HGVDKEGHVVI 319

  Fly    98 VCPFANFDMWGMMHCVTRF-EFQKYLVLLLERFMKIAYDQSQKHGWRARQLVVFF-DMQDVNLKQ 160
            ...:..|....:.....:. :|..:.:.|.|:.:: |.|.|..   .|:...||. |.:  |...
plant   320 YSSYGEFQNKELFSDKEKLNKFLSWRIQLQEKCVR-AIDFSNP---EAKSSFVFVSDFR--NAPG 378

  Fly   161 YAWRPAAECVISTVKQYEANFPELLKMCYIINAPKLFSVAFNIVKKFL-DENTTSKIVIYKSGVD 224
            ...|...:.:...|||:|.|:||.......||.|..:...:......: ...|.||:|:  :|..
plant   379 LGKRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVL--AGPS 441

  Fly   225 RWQEQLFSHVNRKAFPKAWGGEMVDRNGDPQCKALMVWGGKLPEELYIDQSSQQSDRDFVEAQVP 289
            :..:.:|.::..:..|..:||                          :.:.:..::....||.|.
plant   442 KSADTIFKYIAPEQVPVKYGG--------------------------LSKDTPLTEETITEAIVK 480

  Fly   290 KGDKLKLHFKVNVEEQKILSWEFRTFDYDIKFG-------------IYSVDDKTGEKRSEVPLGT 341
            ......:  ::...|...||||.|....|:.:|             |.|...|.|.  ::.|:.|
plant   481 PAANYTI--ELPASEACTLSWELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGS--TDEPVIT 541

  Fly   342 VYSNEMDEIGYISTRPNTTYTVVFDNSASYLRSKKLRY 379
             .|.::.|.|.|        .:..||..|  :.||:.|
plant   542 -DSFKVGEPGKI--------VITIDNQTS--KKKKVLY 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 9/23 (39%)
CRAL_TRIO 81..245 CDD:459890 35/166 (21%)
GPCR_chapero_1 303..381 CDD:480652 24/90 (27%)
PATL1NP_177360.1 CRAL_TRIO_N <247..280 CDD:215024 9/23 (39%)
SEC14 310..465 CDD:214706 37/188 (20%)

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