DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and AT1G55690

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001323358.1 Gene:AT1G55690 / 842018 AraportID:AT1G55690 Length:625 Species:Arabidopsis thaliana


Alignment Length:384 Identity:89/384 - (23%)
Similarity:155/384 - (40%) Gaps:80/384 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPEIS------EEQRAILEKFRKQM--DDALVGTHDDYF-LVRWLRARKWNLEAAEKMLRASLKT 60
            :|.:|      |::.:::.:||:::  .|.|...||:|. |:|:|:||..|:|...::....|:.
plant    62 VPAVSIEDVRDEKEESVVLEFRRKLLERDLLPPRHDEYHTLLRFLKARDLNIEKTTQLWEEMLRW 126

  Fly    61 RAMWNVDNI-EKWD--PPKALQEYLPYGLMGYDNEGSPVLVCPFANFDMWGMMHCVTRFEFQKYL 122
            |..:..|.| |.:|  ..:.:.:|.|.|..|.|.||.||.:..........:|...|...:.||.
plant   127 RKEYGTDTILEDFDFEELEEVLQYYPQGYHGVDKEGRPVYIERLGKAHPSKLMRITTIDRYLKYH 191

  Fly   123 VLLLERFMKIAYDQ---SQKHGWRARQLVVFFDMQDVNLKQYAWRPAAECVISTVKQYE-ANFPE 183
            |...||.::..:..   :.|.  |........|:|.:.:|.:.  |.|..:::.:.:.: :.:||
plant   192 VQEFERALQEKFPACSIAAKR--RICSTTTILDVQGLGIKNFT--PTAANLVAAMSKIDNSYYPE 252

  Fly   184 LLKMCYIINAPKLF-SVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFS-H--VNRKAFPKAWG 244
            .|...||:||...| .:.:...:||||..|.:||.:.:      .:.||. |  ::....|:..|
plant   253 TLHRMYIVNAGTGFKKMLWPAAQKFLDAKTIAKIHVLE------PKSLFKLHEVIDSSQLPEFLG 311

  Fly   245 GE---MVDRNG----------DPQCKALMVWGGKLPEELYIDQSSQQSDRDF------------V 284
            |.   ..|..|          ||:...|:..|   ...|:...:.:.:|..:            :
plant   312 GSCSCFGDGGGCLRSNKGPWNDPEIMKLIYHG---ESSLFRQSTRKLTDPHYSSSYISIHPSKAI 373

  Fly   285 EAQV--------------PKGDKLKLHFKVNVEEQKILSWEFRTFDYDIKFGIYSVDDK 329
            :|:.              |.|........||...:     |.|..|.:   |.||.|||
plant   374 QAETSAAESISCSDVPSSPTGRLCSASSHVNSAYE-----EARASDVN---GYYSCDDK 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 14/43 (33%)
SEC14 75..246 CDD:238099 43/178 (24%)
GOLD_2 303..381 CDD:290608 9/27 (33%)
AT1G55690NP_001323358.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 1 1.000 - - FOG0000197
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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