DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13893 and AT1G30690

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001031119.1 Gene:AT1G30690 / 839949 AraportID:AT1G30690 Length:540 Species:Arabidopsis thaliana


Alignment Length:382 Identity:79/382 - (20%)
Similarity:143/382 - (37%) Gaps:106/382 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DYFLVRWLRARKWNLEAAEKMLRASLKTRAMWNVDNI--EKWDPPKALQEYLPYGLMGYDNEGSP 95
            |..|:::||||.:.:..|.:||:.:||.|....:|:|  |::....|...|    :.|.|.|..|
plant   220 DVILLKFLRARDFKVNEAFEMLKKT
LKWRKQNKIDSILGEEFGEDLATAAY----MNGVDRESHP 280

  Fly    96 VLVCPFANFDMWGMMHCVTRFEFQKYLVLLLERFMKIAYDQSQKHGWRARQLVVFFDMQDVNLK- 159
            |               |        |.|...|.:..|..:::::...|.|..::...:|.:||| 
plant   281 V---------------C--------YNVHSEELYQTIGSEKNREKFLRWRFQLMEKGIQKLNLKP 322

  Fly   160 --------------------QYAWRPAAECVISTVKQYEANFPELLKMCYIINAPKLFSVAFNIV 204
                                ...| ...:.||.|::.   |:||.:.....||.|..|.....::
plant   323 GGVTSLLQIHDLKNAPGVSRTEIW-VGIKKVIETLQD---NYPEFVSRNIFINVPFWFYAMRAVL 383

  Fly   205 KKFLDENTTSKIVIYKSGVDRWQEQLFSHVNRKAFPKAWGG-EMVDRNGDPQCKALMVWGGKLPE 268
            ..||.:.|.||.|:.:..  :.:|.|..::.....|..:|| :.||   |.:      :..:...
plant   384 SPFLTQRTKSKFVVARPA--KVRETLLKYIPADELPVQYGGFKTVD---DTE------FSNETVS 437

  Fly   269 ELYIDQSSQQSDRDFVEAQVPKGDKLKLHFKVNVEEQKILSWEFRTFDYDIKF---------GIY 324
            |:.:...|.::    :|...|             |.:..|.|:.....:::.:         |.|
plant   438 EVVVKPGSSET----IEIPAP-------------ETEGTLVWDIAVLGWEVNYKEEFVPTEEGAY 485

  Fly   325 SVDDKTGEK--RSEVPLGTVYSNEMDEIGYISTRPNTTYTVVFDNSASYLRSKKLRY 379
            :|..:..:|  .:|.|:...:.|  .:.|.|        .:..||.:.  :.||:.|
plant   486 TVIVQKVKKMGANEGPIRNSFKN--SQAGKI--------VLTVDNVSG--KKKKVLY 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 9/23 (39%)
SEC14 75..246 CDD:238099 40/192 (21%)
GOLD_2 303..381 CDD:290608 17/88 (19%)
AT1G30690NP_001031119.1 CRAL_TRIO_N <219..244 CDD:215024 9/23 (39%)
SEC14 273..422 CDD:214706 36/177 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I2453
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

Return to query results.
Submit another query.