DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and PATL2

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_173669.1 Gene:PATL2 / 838859 AraportID:AT1G22530 Length:683 Species:Arabidopsis thaliana


Alignment Length:379 Identity:82/379 - (21%)
Similarity:136/379 - (35%) Gaps:98/379 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 DYFLVRWLRARKWNLEAAEKMLRASLKTRAMWNVDNIEKWDPPKALQEYLPYGLMGYDNEGSPVL 97
            |..|:::||||.:.::.|..||:.:::.|....:|::...|...:..|.|.: ..|.|.:|..|:
plant   365 DVILLKFLRARDFKVKEAFTMLKNT
VQWRKENKIDDLVSEDLEGSEFEKLVF-THGVDKQGHVVI 428

  Fly    98 VCPFANFD---------------MWGMMHCVTRFEFQKYLVLLLERFMKIAYDQSQKHGWRARQL 147
            ...:..|.               .|       |.:||:..|..|        |.|.:    |:..
plant   429 YSSYGEFQNKEIFSDKEKLSKFLKW-------RIQFQEKCVRSL--------DFSPE----AKSS 474

  Fly   148 VVFF-DMQDV-NLKQYA-WRPAAECVISTVKQYEANFPELLKMCYIINAPKLFSVAFNIVKKFL- 208
            .||. |.::. .|.|.| |    :.:...|||:|.|:||.:.....||.|..:...:......: 
plant   475 FVFVSDFRNAPGLGQRALW----QFIKRAVKQFEDNYPEFVAKELFINVPWWYIPYYKTFGSIIT 535

  Fly   209 DENTTSKIVIYKSGVDRWQEQLFSHVNRKAFPKAWGGEMVDRNGDPQCKALMVWGGKLPEELYID 273
            ...|.||:|:  ||..:..|.:|.:|..:..|..:||                          :.
plant   536 SPRTRSKMVL--SGPSKSAETIFKYVAPEVVPVKYGG--------------------------LS 572

  Fly   274 QSSQQSDRDFVEAQVPKGDKLKLHFKVNVEEQKILSWEFRTFDYDIKFG-------------IYS 325
            :.|..:..|.|...|.|... |....:...|...||||.|....|:.:|             |.|
plant   573 KDSPFTVEDGVTEAVVKSTS-KYTIDLPATEGSTLSWELRVLGADVSYGAQFEPSNEASYTVIVS 636

  Fly   326 VDDKTGEKRSEVPLGTVYSNEMDEIGYISTRPNTTYTVVFDNSASYLRSKKLRY 379
            .:.|.|.....|...:..::|..::           .:..||..  .:.||:.|
plant   637 KNRKVGLTDEPVITDSFKASEAGKV-----------VITIDNQT--FKKKKVLY 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 9/23 (39%)
SEC14 75..246 CDD:238099 44/189 (23%)
GOLD_2 303..381 CDD:290608 19/90 (21%)
PATL2NP_173669.1 CRAL_TRIO_N <357..389 CDD:215024 9/23 (39%)
SEC14 410..571 CDD:238099 45/212 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I2453
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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