DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13893 and COW1

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001328041.1 Gene:COW1 / 829610 AraportID:AT4G34580 Length:554 Species:Arabidopsis thaliana


Alignment Length:434 Identity:104/434 - (23%)
Similarity:187/434 - (43%) Gaps:64/434 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGPL-PEISEEQRAILEKFRKQ--MDDALVGTHDD-YFLVRWLRARKWNLEAAEKMLRASLKTR 61
            ||.|: .:|..|....|:.||:.  :|:.|....|| :.::|:|||||:::|.|::|....::.|
plant    50 MSVPIEDDIDAEDLQALDAFRQALILDELLPSKLDDLHMMLRFLRARKFDIEKAKQMWSDMIQWR 114

  Fly    62 AMWNVDN-IEKWDPPK--ALQEYLPYGLMGYDNEGSPVLVCPFANFDMWGMMHCVTRFEFQKYLV 123
            ..:..|. ||.:|..:  .:.::.|.|..|.|.||.||.:......|...::...|...:.||.|
plant   115 KDFGADTIIEDFDFEEIDEVMKHYPQGYHGVDKEGRPVYIERLGQIDANKLLQVTTMDRYVKYHV 179

  Fly   124 LLLERFMKIAYDQ----SQKHGWRARQLVVFFDMQDVNLKQYAWRPAAECVISTVKQYEANFPEL 184
            ...|:..|:.:..    :.||   ..|.....|:|.|.||.:: :.|.|.:....|....|:||.
plant   180 KEFEKTFKVKFPSCSVAANKH---IDQSTTILDVQGVGLKNFS-KSARELLQRLCKIDNENYPET 240

  Fly   185 LKMCYIINAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVNRKAFPKAWGGEMV- 248
            |...:||||...|.:.::.||.|||..||:||.:..   :::..:|...::....|:.:||... 
plant   241 LNRMFIINAGSGFRLLWSTVKSFLDPKTTAKIHVLG---NKYHSKLLEVIDASELPEFFGGACTC 302

  Fly   249 -DRNG----------DPQ-----------CKALMVWGGKLPEELYIDQSSQQSDRDFVEAQVPKG 291
             |:.|          ||:           |..:     ...|..::||....|..:.:|....|.
plant   303 EDKGGCMRSDKGPWNDPEVLKIAINREAKCSPI-----SEDEHKHVDQGRSTSGFESLERIKKKT 362

  Fly   292 DKLKLHFK--VNVEEQKILSWEFRT---FDYDIKFGIYSVDDKTGEKRSE-VPLGTVYSNEMDEI 350
            |:..::.|  ..:::...::|..:|   .::.|..|:.....|...|:.: :.:|.|.:..|..:
plant   363 DEDNVYEKQIATIDKSMDMAWLAKTQKAENFPISKGLECYVRKGAPKKGDGLLVGGVMAFVMGIV 427

  Fly   351 GYISTRPNT----TYTVVFDNSASYLRSKKLRYWVDLISEEEEG 390
            ..:....:.    |...::.||..|..|.|        |::.:|
plant   428 AMVRLSKDVPRKLTEAALYGNSVCYEESTK--------SKQNQG 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 16/43 (37%)
SEC14 75..246 CDD:238099 47/176 (27%)
GOLD_2 303..381 CDD:290608 15/85 (18%)
COW1NP_001328041.1 CRAL_TRIO_N 64..107 CDD:215024 15/42 (36%)
SEC14 133..298 CDD:214706 46/171 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 1 1.000 - - FOG0000197
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.