DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and SFH3

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001031389.1 Gene:SFH3 / 816693 AraportID:AT2G21540 Length:548 Species:Arabidopsis thaliana


Alignment Length:404 Identity:101/404 - (25%)
Similarity:172/404 - (42%) Gaps:70/404 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EISEEQRAILEKFRKQ--MDDALVGTHDD-YFLVRWLRARKWNLEAAEKMLRASLKTRAMWNVDN 68
            :|..|:...::.||:.  :|:.|...||| :.::|:|||||::||.|::|....:..|..:.||.
plant    64 DIDLEELQAVDAFRQALILDELLPSKHDDHHMMLRFLRARKFDLEKAKQMWTDMIHWRKEFGVDT 128

  Fly    69 IEKWDPPKALQE---YLPYGLMGYDNEGSPVLVCPFANFDMWGMMHCVTRFEFQKYLVLLLERFM 130
            |.:....|.:.|   |.|.|..|.|.:|.||.:......|...:|...|...:.||.|...|:..
plant   129 IMEDFDFKEIDEVLKYYPQGYHGVDKDGRPVYIERLGQVDATKLMQVTTIDRYVKYHVREFEKTF 193

  Fly   131 KIAYD----QSQKHGWRARQLVVFFDMQDVNLKQYAWRPAAECVISTVKQYEA-NFPELLKMCYI 190
            .|...    .::||   ..|.....|:|.|.||.::  .||..::..:::.:: |:||.|...:|
plant   194 NIKLPACSIAAKKH---IDQSTTILDVQGVGLKSFS--KAARDLLQRIQKIDSDNYPETLNRMFI 253

  Fly   191 INAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVNRKAFPKAWGGE--MVDRNG- 252
            |||...|.:.::.||.|||..||:||.:..   :::|.:|...::....|:..||.  ..|:.| 
plant   254 INAGSGFRLLWSTVKSFLDPKTTAKIHVLG---NKYQSKLLEIIDSNELPEFLGGNCTCADKGGC 315

  Fly   253 ---------DPQCKALMVWG-GKLPEE---------LYIDQSSQQSDRDFVEAQ--------VPK 290
                     ||....::..| ||.|.:         :.:|:::......|.:.:        :|.
plant   316 MRSDKGPWNDPDIFKMVQNGEGKCPRKTLSNIEEKTISVDENTTMKSDSFAKNKFDAENTKFIPM 380

  Fly   291 GDK--------LKLHFKVNVEEQKIL----------SWEFRTFD--YDIKFGIYSVDDKTGEKRS 335
            .||        ..|| |.|..|.:.|          ..|...|.  ..:..|:.:|...|.....
plant   381 IDKTVNASTWPTNLH-KSNYPEPEDLYSAVKPSQRRGGEGYLFGGVMSLVMGLMTVVRLTKNMPR 444

  Fly   336 EVPLGTVYSNEMDE 349
            ::....:|..|:|:
plant   445 KLTEAAIYGGEVDK 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 17/43 (40%)
SEC14 75..246 CDD:238099 50/178 (28%)
GOLD_2 303..381 CDD:290608 10/59 (17%)
SFH3NP_001031389.1 CRAL_TRIO_N 71..117 CDD:215024 17/45 (38%)
SEC14 137..307 CDD:214706 50/177 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 1 1.000 - - FOG0000197
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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