DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and rlbp1

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:306 Identity:64/306 - (20%)
Similarity:129/306 - (42%) Gaps:74/306 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GPLPEIS-------------------EEQRAIL-------EKFRKQMDDALVGTHDDYFLVRWLR 41
            |.|||.:                   :|.||::       |:..|.:.|.:....||:|| |::|
 Frog    38 GKLPEYTIQKAKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFL-RFIR 101

  Fly    42 ARKWNLEAAEKMLRASLKTRAMWNVDNIEKWD--PPKALQEYLPYGLMGY----DNEGSPVLVCP 100
            |||:::..|.::|:..:..|..:.    |.::  .|:|::..:..|..|.    |..|..:|:  
 Frog   102 ARKFDVSRAYELLKGYVNFRQQYP----ELFEDLTPEAVRSTIEAGYPGILTSRDKNGRVILL-- 160

  Fly   101 FANFDMWGMMHCVTRFEFQKYLVLLLERFMKIAYDQSQKHGWRARQLVVFFDMQDVNLKQYAWRP 165
             .|.:.|.... :|..|..:...::||..::  .:::|.:|:...:          |.|.:..:.
 Frog   161 -FNIESWDYEE-ITFDEILRAYCIILESLLE--NEETQINGFCIIE----------NFKGFTMQQ 211

  Fly   166 AAECVISTVKQ----YEANFPELLKMCYIINAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRW 226
            |:....|.:|:    .:.:||...|..:.|:.|..|:..:|:||.||......::.::...:   
 Frog   212 ASGIKPSELKKMVDMLQDSFPARFKAVHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDL--- 273

  Fly   227 QEQLFSHVNRKAFPKAWGGEMVDRNGDPQCKALMVWGGK-LPEELY 271
             |..:..::....|..:||.:      |:      :.|| :.|||:
 Frog   274 -EGFYKEIDADILPADFGGNL------PK------YDGKIIAEELF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 14/47 (30%)
SEC14 75..246 CDD:238099 34/178 (19%)
GOLD_2 303..381 CDD:290608
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 17/57 (30%)
CRAL_TRIO 143..292 CDD:306996 32/168 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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