DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and rlbp1a

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:293 Identity:59/293 - (20%)
Similarity:124/293 - (42%) Gaps:67/293 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPEISEEQRAILEKFRKQMDDAL-------------VGTHDDYFLVRWLRARKWNLEAAEKMLRA 56
            |.|..|::.:.:::.|..:.|..             .|...|..|:|::||||:::..|.::::.
Zfish    51 LNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKEPDSLLLRFIRARKFDVARAHELMKG 115

  Fly    57 SLKTRAMWNVDNIEKWD--PPKALQEYLPYG----LMGYDNEGSPVLVCPFANFDMWGMMHCVTR 115
            .::.|.    |..|.::  .|:|::..:..|    |...|..|..||:   .|.|.|.:.. ||.
Zfish   116 YVRFRR----DYPELFENLTPEAVRSTIEAGYPRILSTRDKNGRVVLL---FNIDNWDLEE-VTF 172

  Fly   116 FEFQKYLVLLLERFMKIAYDQSQKHGWRARQLVVFFDMQDVN------LKQYAWRPAAECVISTV 174
            .|..:...::||:.::  .:::|.:|:...:....|.||..:      ||:            .|
Zfish   173 DETLRAYCVILEKLLE--NEETQINGFVLIENFKGFTMQHASGIKHTELKK------------MV 223

  Fly   175 KQYEANFPELLKMCYIINAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVNRKAF 239
            ...:.:||...|..::|:.|..|:..:|:||.|:......::.::...:|             .:
Zfish   224 DMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELD-------------GY 275

  Fly   240 PKAWGGEMVDRNGD---PQC----KALMVWGGK 265
            .:.:|.|::..:.|   |.|    .|:.::|.:
Zfish   276 LRDFGAEILPPDFDGTGPACDGRETAIKLFGSE 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 11/53 (21%)
SEC14 75..246 CDD:238099 36/180 (20%)
GOLD_2 303..381 CDD:290608
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 11/56 (20%)
CRAL_TRIO 142..291 CDD:279044 36/179 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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