DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13893 and spo20

DIOPT Version :10

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_593003.1 Gene:spo20 / 2543628 PomBaseID:SPAC3H8.10 Length:286 Species:Schizosaccharomyces pombe


Alignment Length:270 Identity:76/270 - (28%)
Similarity:117/270 - (43%) Gaps:38/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGPLP------------EISEEQRAILEKFRKQMDD-ALVGTHDDYFLVRWLRARKWNLEAAEK 52
            :|.|.|            .::..|:|.|:..|.::.. ......||..|:|:|||||:||:.:.:
pombe     5 ISDPYPLTNPNAPLGHPGHLNSTQQATLDSMRLELQKLGYTERLDDATLLRFLRARKFNLQQSLE 69

  Fly    53 MLRASLKTRAMWNVDNIEK---WDPPKALQEYLPYGLMGYDNEGSPVLVCPFANFDMWGMMHCVT 114
            |.....|.|..:.||::.|   :|..:|:.:|.|......|.:|.||.|....|.|:..:....|
pombe    70 MFIKCEKWRKEFGVDDLIKNFHYDEKEAVSKYYPQFYHKTDIDGRPVYVEQLGNIDLKKLYQITT 134

  Fly   115 RFEFQKYLV-----LLLERFMKIAYDQSQKHGWRARQLVVFFDMQDVNLKQYAWRPAAECVISTV 174
            .....:.||     |.|:||...    |:|.|..........|::.|.:      .:...|.|.:
pombe   135 PERMMQNLVYEYEMLALKRFPAC----SRKAGGLIETSCTIMDLKGVGI------TSIHSVYSYI 189

  Fly   175 KQYEA----NFPELLKMCYIINAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVN 235
            :|..:    .:||.:...|:||||..||.|||::|.||||.|..||.|..|   .::..|...:.
pombe   190 RQASSISQDYYPERMGKFYVINAPWGFSSAFNLIKGFLDEATVKKIHILGS---NYKSALLEQIP 251

  Fly   236 RKAFPKAWGG 245
            ....|...||
pombe   252 ADNLPAKLGG 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 14/41 (34%)
CRAL_TRIO 81..245 CDD:459890 48/172 (28%)
GPCR_chapero_1 303..381 CDD:480652
spo20NP_593003.1 CRAL_TRIO_N 29..74 CDD:215024 15/44 (34%)
SEC14 94..264 CDD:214706 51/181 (28%)
Blue background indicates that the domain is not in the aligned region.

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