DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13893 and SPBC365.01

DIOPT Version :9

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:NP_596030.1 Gene:SPBC365.01 / 2541046 PomBaseID:SPBC365.01 Length:355 Species:Schizosaccharomyces pombe


Alignment Length:307 Identity:68/307 - (22%)
Similarity:118/307 - (38%) Gaps:73/307 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQRAILEKFRKQ------------MDDALVGTHDDYFLVRWLRARKWNLEAAEKMLRASLKTRAM 63
            ||.:.::||..|            .||.      |..|:|:|:|||:.:..:..||..::..|..
pombe    24 EQPSYIQKFPSQESLYVSFFEQCAFDDF------DLTLLRFLKARKFVVTDSSDMLANAIVWRQQ 82

  Fly    64 WNVDNIEKWDPPKALQEYLP---YGLMGYDNEGSPVLVCPFANF-------DMWGMMHCVTRFEF 118
            .|:.:|.........|.::.   |.:.|.|.:|..::.....||       ||          |.
pombe    83 ANLRSIMVRGENGLNQNFVKASMYFIWGQDKKGRAIVFLNLHNFIPPKNTKDM----------EE 137

  Fly   119 QKYLVLLLERFMKIAYDQSQKHGWRARQLV--VFFDMQDVNLKQYAWRPAAECVISTVKQYEANF 181
            .|.|:|......::..|..|........||  .:|..::::|      ..|.....|.:.|   :
pombe   138 LKALILYAMENARLFLDSEQNAAKGVLGLVDLTYFSRKNIDL------DFARVFAETFQNY---Y 193

  Fly   182 PELLKMCYIINA---PKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVNRKAFPKAW 243
            ||:|....|:.:   ..||...::|.|.|||....||:...|..      |:..:|:.|..|.:.
pombe   194 PEILGQALIVGSGFRMALFEGVWSIGKYFLDPEVRSKVTFCKPA------QVSGYVDSKYIPLSM 252

  Fly   244 GGEMVD----RNGDPQCKALMVWGGKLPEELYIDQSSQQSDRDFVEA 286
            .|:..:    ....|:...:    || ||      :.::.|:::|:|
pombe   253 HGQFDETKLYERAPPETAGI----GK-PE------NYEELDKEYVDA 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 14/52 (27%)
SEC14 75..246 CDD:238099 40/185 (22%)
GOLD_2 303..381 CDD:290608
SPBC365.01NP_596030.1 CRAL_TRIO_N 26..73 CDD:281722 12/52 (23%)
SEC14 100..257 CDD:214706 40/181 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1304
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.