DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13893 and LOC1276085

DIOPT Version :10

Sequence 1:NP_612042.3 Gene:CG13893 / 38074 FlyBaseID:FBgn0035146 Length:407 Species:Drosophila melanogaster
Sequence 2:XP_315393.5 Gene:LOC1276085 / 1276085 VectorBaseID:AGAMI1_004998 Length:328 Species:Anopheles gambiae


Alignment Length:338 Identity:82/338 - (24%)
Similarity:131/338 - (38%) Gaps:78/338 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQRAILEKFRKQMDDALV---GTH----DDYFLVRWLRARKWNLEAAEKMLRASLKTR---AMW- 64
            |:.||:|:..:||.|.:.   ..|    |..||:|:||.||::..||.:.|...|.:|   ..| 
Mosquito    39 EEPAIVEQALEQMRDWIAKNPAIHTCRTDASFLLRFLRVRKFSHLAACETLERYLVSRQRFPAWY 103

  Fly    65 -NVDNIEKWDPPKALQEY-LPYGLMGYDNEGSPVLVCPFANFDMWGMMHCVTRFEFQKYLVLLLE 127
             .:|..|.|.......|: :|   :|.|..|..|.:..:||.|       :.|||....:.....
Mosquito   104 SKLDTAEPWVQVMIDSEFVVP---LGRDELGRVVYLVRYANLD-------IDRFEVTDQIRFFTM 158

  Fly   128 RFMKIAYDQ-SQKHGWRARQLVVFFDMQDVNLKQYA-WRPAAECVISTVKQY----EANFPELLK 186
            .|..|.:|: :|..|     ||..||..:|.::.:| |.      ::.:|.|    ....|..:|
Mosquito   159 VFETICHDELNQIAG-----LVCVFDETNVPMRAFAQWS------LTDIKNYIDCVTKALPLRVK 212

  Fly   187 MCYIINAPKLFSVAFNIVKKFLDENTTSKIVIYKSGVDRWQEQLFSHVN-RKAFPKAWGG---EM 247
            ..:::|.|...:.....:.....|...|::..|:|     .::.....| ....||.:.|   |.
Mosquito   213 EVHVVNLPLFGAAVGEWIMSCCSEKLRSRLKCYRS-----MDEFAGKCNLLSLLPKEYYGGKQEA 272

  Fly   248 VD-----RNGDPQCKALMVWGGKLPEELYIDQSSQQSDRD-FVEAQV-PKGDKLKLHFKVNVEEQ 305
            :|     |....:|:.::         |.:|.......|. .|::|. |.||           |.
Mosquito   273 MDLKRQLRESLDRCRNII---------LALDDMKVDERRCLLVKSQTKPGGD-----------EG 317

  Fly   306 KILSWEFRTFDYD 318
            .|.|  ||..|.|
Mosquito   318 MIGS--FRKLDVD 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13893NP_612042.3 CRAL_TRIO_N 16..57 CDD:215024 16/47 (34%)
CRAL_TRIO 81..245 CDD:459890 36/171 (21%)
GPCR_chapero_1 303..381 CDD:480652 7/16 (44%)
LOC1276085XP_315393.5 None

Return to query results.
Submit another query.