DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and scrt1a

DIOPT Version :10

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001107073.1 Gene:scrt1a / 564658 ZFINID:ZDB-GENE-080219-30 Length:279 Species:Danio rerio


Alignment Length:291 Identity:121/291 - (41%)
Similarity:150/291 - (51%) Gaps:69/291 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VKPLPL--YASSDDDSNY-YSHKVFDRRKLRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQG-- 94
            ||.:.|  ::|||.:|:| .|......|...:..|||..:.|.....|.|         |::.  
Zfish     7 VKKVKLDDFSSSDLESSYGRSRADISLRFHEKAYISDYMTPAPYDGESDS---------GIKVPS 62

  Fly    95 ----HSSVHHHHG--------------EQGEILNSTSLLE------------------------- 116
                :.|:|..:|              ..|.|...|::.|                         
Zfish    63 PGPIYDSIHSDYGAPDSDQPDSPQSEISSGYINGDTAVSEGYTVDAFFITDGRSRRKAISSPRTL 127

  Fly   117 DEHICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFC 181
            ..|.|.||||.|:|||||:||:|||||:..|.|:.||.|.||||||||.:||:.||:...:|..|
Zfish   128 QRHTCNECGKTYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHLLTHDLKHKCDIC 192

  Fly   182 GKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSY 246
            ||.||||||||||:|:|||||||.|..|.|||||:||||||:||||..|.:.|.||.|.||||||
Zfish   193 GKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYKCKRCNKTFALKSY 257

  Fly   247 LYKHEESSCMKNRGGVPGSGAASGNRPPSSP 277
            |.||.||:|.|            |...|.||
Zfish   258 LNKHYESACFK------------GAFAPLSP 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 14/19 (74%)
zf-C2H2 176..198 CDD:395048 15/21 (71%)
C2H2 Zn finger 178..198 CDD:275368 15/19 (79%)
zf-H2C2_2 191..214 CDD:463886 16/22 (73%)
zf-C2H2 204..226 CDD:395048 15/21 (71%)
C2H2 Zn finger 206..226 CDD:275368 14/19 (74%)
C2H2 Zn finger 234..250 CDD:275368 11/15 (73%)
scrt1aNP_001107073.1 zf-C2H2 130..152 CDD:395048 15/21 (71%)
C2H2 Zn finger 132..152 CDD:275368 14/19 (74%)
C2H2 Zn finger 163..180 CDD:275371 12/16 (75%)
zf-C2H2 187..209 CDD:395048 15/21 (71%)
C2H2 Zn finger 189..209 CDD:275368 15/19 (79%)
zf-H2C2_2 202..225 CDD:463886 16/22 (73%)
C2H2 Zn finger 217..237 CDD:275368 14/19 (74%)
zf-C2H2 217..237 CDD:395048 14/19 (74%)
C2H2 Zn finger 245..261 CDD:275368 11/15 (73%)

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