DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Scrt2

DIOPT Version :9

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001153882.1 Gene:Scrt2 / 545474 MGIID:2139287 Length:311 Species:Mus musculus


Alignment Length:222 Identity:106/222 - (47%)
Similarity:133/222 - (59%) Gaps:19/222 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 YSHKVF---DRRKLRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNST 112
            ||...|   |.|..||...:..::..:..:..........:..|..|.::...|           
Mouse   106 YSMDAFFISDGRSRRRRAGAGGDAAGAGDAGGGGGGGGGGERAGRSGATAGGGH----------- 159

  Fly   113 SLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCE 177
                 .|.|.||||.|:|||||:||:|||||:..:.||.||.|.|.||||||.:|||.|||...:
Mouse   160 -----RHACAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKAYVSMPALAMHVLTHNLRHK 219

  Fly   178 CQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFA 242
            |..|||.||||||||||:|:|||||||.|..|.|||||:||||||:||||..|.:.|.:|.|:||
Mouse   220 CGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYRCRQCDKSFA 284

  Fly   243 LKSYLYKHEESSCMKNRGGVPGSGAAS 269
            |||||:||.|::|:|.....|.:|.||
Mouse   285 LKSYLHKHCEAACVKAAEPPPSAGPAS 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 15/21 (71%)
C2H2 Zn finger 121..141 CDD:275368 14/19 (74%)
zf-C2H2 176..198 CDD:278523 15/21 (71%)
C2H2 Zn finger 178..198 CDD:275368 15/19 (79%)
zf-H2C2_2 191..214 CDD:290200 16/22 (73%)
zf-C2H2 204..226 CDD:278523 15/21 (71%)
C2H2 Zn finger 206..226 CDD:275368 14/19 (74%)
zf-H2C2_2 218..242 CDD:290200 13/23 (57%)
C2H2 Zn finger 234..250 CDD:275368 10/15 (67%)
Scrt2NP_001153882.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..90
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..156 4/35 (11%)
C2H2 Zn finger 163..183 CDD:275368 14/19 (74%)
COG5048 <216..>283 CDD:227381 43/66 (65%)
zf-C2H2 218..240 CDD:278523 15/21 (71%)
C2H2 Zn finger 220..240 CDD:275368 15/19 (79%)
zf-H2C2_2 233..256 CDD:290200 16/22 (73%)
C2H2 Zn finger 248..268 CDD:275368 14/19 (74%)
zf-H2C2_2 260..284 CDD:290200 13/23 (57%)
C2H2 Zn finger 276..292 CDD:275368 10/15 (67%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837656
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000984
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24388
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3156
SonicParanoid 1 1.000 - - X1445
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.870

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