DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and snai2

DIOPT Version :10

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_989424.1 Gene:snai2 / 395065 XenbaseID:XB-GENE-487371 Length:266 Species:Xenopus tropicalis


Alignment Length:250 Identity:105/250 - (42%)
Similarity:137/250 - (54%) Gaps:33/250 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IPE-ELYNLTQLAEVTLSVG---PLVTDEVKPLPLYASSDDDSNYYSHKVFDRRKLRRCTISDSN 70
            :|: |||:....:.:|:..|   |.:..::.||..|.||                |.|.      
 Frog    42 LPQPELYSSVAYSPITVWTGLLHPPLPSDLSPLSGYPSS----------------LGRV------ 84

  Fly    71 SCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHICPECGKKYSTSSNLA 135
                  |....|..||:||.|.:...| ......|.::.:|.::..::..|..|.|.|||.|.||
 Frog    85 ------SPPPQSDTSSKDHSGSESPIS-DEEERLQTKLSDSHAIEAEKFQCSLCSKTYSTFSGLA 142

  Fly   136 RHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHIRTHTG 200
            :|:|.|.....:|:..|.||||.|||:.|..||:|||...|.|:.|||.||||||||||||||||
 Frog   143 KHKQLHCDAQSRKSFSCKYCEKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTG 207

  Fly   201 EKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSC 255
            ||||.|..|.:||||:||||||:||||:.|.:.|..|.|.|:..|.|:|||||.|
 Frog   208 EKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGC 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-C2H2 176..198 CDD:395048 17/21 (81%)
C2H2 Zn finger 178..198 CDD:275368 16/19 (84%)
zf-H2C2_2 191..214 CDD:463886 17/22 (77%)
zf-C2H2 204..226 CDD:395048 14/21 (67%)
C2H2 Zn finger 206..226 CDD:275368 13/19 (68%)
C2H2 Zn finger 234..250 CDD:275368 6/15 (40%)
snai2NP_989424.1 C2H2 Zn finger 128..148 CDD:275370 11/19 (58%)
C2H2 Zn finger 159..179 CDD:275368 12/19 (63%)
C2H2 Zn finger 185..205 CDD:275368 16/19 (84%)
zf-H2C2_2 198..221 CDD:463886 17/22 (77%)
zf-C2H2 211..233 CDD:395048 14/21 (67%)
C2H2 Zn finger 213..233 CDD:275368 13/19 (68%)
zf-H2C2_2 225..250 CDD:463886 14/24 (58%)
C2H2 Zn finger 241..257 CDD:275368 6/15 (40%)

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