DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Blimp-1

DIOPT Version :9

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001261442.1 Gene:Blimp-1 / 38638 FlyBaseID:FBgn0035625 Length:1216 Species:Drosophila melanogaster


Alignment Length:428 Identity:100/428 - (23%)
Similarity:154/428 - (35%) Gaps:104/428 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SHKVFDRRKLRRCTISDSNSCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQG---------- 106
            ||..|||:           |.|||.:.|.::.     || ||..:.:.:|...|.          
  Fly   795 SHSPFDRQ-----------SNASSGAGSATNL-----HL-LQTSTQMLNHPLMQPLTPLQRLSPL 842

  Fly   107 EILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSI------MDKKARH-CPYCEKVYVSMPA 164
            .|...:||..|.:.||..|...|.:|..:|   .:||:      .|.|..: |..|.|.:..:..
  Fly   843 RISPPSSLSPDGNSCPRSGSPLSPNSLASR---GYRSLPYPLKKKDGKMHYECNVCCKTFGQLSN 904

  Fly   165 YSMHVRTHN--QGCECQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHS 227
            ..:|:|||:  :..:|..|.|.|::...||.|...||||||.:|.:|:|.|:..|||:.|::.||
  Fly   905 LKVHLRTHSGERPFKCNVCTKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHS 969

  Fly   228 NTKPHTCARCGKAFALKSYLYKHEE-----------------------------SSCMKNR---- 259
            ..||:.|..|.:.|....:|..|:.                             :||..|.    
  Fly   970 GQKPYACDLCPQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCKPNNLEEE 1034

  Fly   260 ---GGVPGSGAASGNRPPSSPKRQQAEVTSGTISALAPGSPAAAVCAASDSAKSTLANKLLQKEK 321
               .....|.....:.|....:....::|.....|:.||....:....|......|.|.:..:::
  Fly  1035 LAMAAAATSECLDKDHPEPDSREAYEQLTQHMHPAVHPGLRHLSSGGQSPPRLIPLGNHMAPQQQ 1099

  Fly   322 DRRQAAMAF--QGFPAGPEVTAYSHA--------TSAQEEYEKFKRINVIQPKVMPHRVPSLYQD 376
            ..:|.....  ||.|. |.:....|:        |:|.:           .|...||...:....
  Fly  1100 SHQQQQQQHQQQGVPP-PHLLMTQHSVGPAPMLLTTASQ-----------LPPPPPHHQQNSPSR 1152

  Fly   377 LLPNRHVPLALPLAMPYHFQGQATSTGQSDPTSVQEQP 414
            ||.:.|       |.|...|.|.....|..|..::..|
  Fly  1153 LLQHGH-------AHPLQMQQQQQQQQQHSPKGLKSLP 1183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 6/21 (29%)
C2H2 Zn finger 121..141 CDD:275368 6/19 (32%)
zf-C2H2 176..198 CDD:278523 7/21 (33%)
C2H2 Zn finger 178..198 CDD:275368 7/19 (37%)
zf-H2C2_2 191..214 CDD:290200 12/22 (55%)
zf-C2H2 204..226 CDD:278523 8/21 (38%)
C2H2 Zn finger 206..226 CDD:275368 8/19 (42%)
zf-H2C2_2 218..242 CDD:290200 9/23 (39%)
C2H2 Zn finger 234..250 CDD:275368 4/15 (27%)
Blimp-1NP_001261442.1 SET 133..260 CDD:214614
C2H2 Zn finger 892..912 CDD:275368 5/19 (26%)
zf-H2C2_2 904..929 CDD:290200 8/24 (33%)
C2H2 Zn finger 920..940 CDD:275368 7/19 (37%)
zf-H2C2_2 932..957 CDD:290200 13/24 (54%)
C2H2 Zn finger 948..968 CDD:275368 8/19 (42%)
zf-H2C2_2 960..985 CDD:290200 10/24 (42%)
C2H2 Zn finger 976..996 CDD:275368 5/19 (26%)
C2H2 Zn finger 1004..1023 CDD:275368 0/18 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457075
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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