DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Scrt2

DIOPT Version :10

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_001178834.1 Gene:Scrt2 / 366229 RGDID:1564796 Length:305 Species:Rattus norvegicus


Alignment Length:304 Identity:121/304 - (39%)
Similarity:159/304 - (52%) Gaps:54/304 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QATPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNYYSHKV----FDRRKLRRCTI 66
            |.:.:|...|:            ||.|..|  ||.......|:.|.:|.:    :|..:.....:
  Rat    16 QCSGVPAPTYH------------PLETAYV--LPGTRGPPGDNGYVAHCMPPSGYDGEQKPGLEL 66

  Fly    67 SDSN----SCASSSSSSTSSRQSSEDHLGLQGHSSVHHHH------------------------- 102
            :.:.    :.||...|...|.|||......:|.::|...:                         
  Rat    67 APTEPAYPAAASEEYSDPESPQSSLSARYFRGEAAVTDSYSMDAFFISDGRSRRRRAGAGGDAAG 131

  Fly   103 -------GEQGEILNSTSLLEDEHICPECGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYV 160
                   ||:.....:|:.....|.|.||||.|:|||||:||:|||||:..:.||.||.|.|.||
  Rat   132 AGDGGGGGERAGRSGATAGGGHRHACAECGKTYATSSNLSRHKQTHRSLDSQLARKCPTCGKAYV 196

  Fly   161 SMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQT 225
            ||||.:|||.|||...:|..|||.||||||||||:|:|||||||.|..|.|||||:||||||:||
  Rat   197 SMPALAMHVLTHNLRHKCGVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQT 261

  Fly   226 HSNTKPHTCARCGKAFALKSYLYKHEESSCMKNRGGVPGSGAAS 269
            ||..|.:.|.:|.|:|||||||:||.|::|:|.....|.:|.||
  Rat   262 HSAFKHYRCRQCDKSFALKSYLHKHCEAACVKAAEPPPSAGPAS 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 14/19 (74%)
zf-C2H2 176..198 CDD:395048 15/21 (71%)
C2H2 Zn finger 178..198 CDD:275368 15/19 (79%)
zf-H2C2_2 191..214 CDD:463886 16/22 (73%)
zf-C2H2 204..226 CDD:395048 15/21 (71%)
C2H2 Zn finger 206..226 CDD:275368 14/19 (74%)
C2H2 Zn finger 234..250 CDD:275368 10/15 (67%)
Scrt2NP_001178834.1 C2H2 Zn finger 157..177 CDD:275368 14/19 (74%)
COG5048 <210..>277 CDD:227381 43/66 (65%)
C2H2 Zn finger 214..234 CDD:275368 15/19 (79%)
C2H2 Zn finger 242..262 CDD:275368 14/19 (74%)
C2H2 Zn finger 270..286 CDD:275368 10/15 (67%)

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