DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and scrt2

DIOPT Version :9

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_998802.1 Gene:scrt2 / 325372 ZFINID:ZDB-GENE-030131-4097 Length:312 Species:Danio rerio


Alignment Length:203 Identity:105/203 - (51%)
Similarity:129/203 - (63%) Gaps:12/203 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 SSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLED---------EHICPECGKKYS 129
            ||.|.|.|...:.:......|.|   ...||..|...:..:.::         .|.|.||||.|:
Zfish   111 SSESESLSEGYTMDAFFISDGRS---RRKGEVSEAAKADEVEKEVVGVNNGGARHTCNECGKTYA 172

  Fly   130 TSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGH 194
            |||||:||:|||||:..|.||.||.|:||||||||.:||:.||:...:|..|.|.||||||||||
Zfish   173 TSSNLSRHKQTHRSLDSKMARKCPTCDKVYVSMPALAMHILTHDLKHKCHVCSKAFSRPWLLQGH 237

  Fly   195 IRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSCMKNR 259
            :|:|||||||.|..|.|||||:||||||:||||..|.::|.||.|.|||||||.||.||:|.:..
Zfish   238 MRSHTGEKPFACAHCGKAFADRSNLRAHMQTHSAFKHYSCKRCNKTFALKSYLNKHYESACFRGS 302

  Fly   260 GGVPGSGA 267
            |....||:
Zfish   303 GDEDESGS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 15/21 (71%)
C2H2 Zn finger 121..141 CDD:275368 14/19 (74%)
zf-C2H2 176..198 CDD:278523 14/21 (67%)
C2H2 Zn finger 178..198 CDD:275368 14/19 (74%)
zf-H2C2_2 191..214 CDD:290200 16/22 (73%)
zf-C2H2 204..226 CDD:278523 15/21 (71%)
C2H2 Zn finger 206..226 CDD:275368 14/19 (74%)
zf-H2C2_2 218..242 CDD:290200 14/23 (61%)
C2H2 Zn finger 234..250 CDD:275368 11/15 (73%)
scrt2NP_998802.1 zf-C2H2 162..184 CDD:278523 15/21 (71%)
C2H2 Zn finger 164..184 CDD:275368 14/19 (74%)
C2H2 Zn finger 195..212 CDD:275371 12/16 (75%)
COG5048 219..>295 CDD:227381 52/75 (69%)
zf-C2H2 219..241 CDD:278523 14/21 (67%)
C2H2 Zn finger 221..241 CDD:275368 14/19 (74%)
zf-H2C2_2 234..257 CDD:290200 16/22 (73%)
zf-C2H2 247..269 CDD:278523 15/21 (71%)
C2H2 Zn finger 249..269 CDD:275368 14/19 (74%)
C2H2 Zn finger 277..293 CDD:275368 11/15 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581360
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D545011at33208
OrthoFinder 1 1.000 - - FOG0000984
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24388
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1445
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.850

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