DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Snai2

DIOPT Version :10

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_037167.1 Gene:Snai2 / 25554 RGDID:3722 Length:268 Species:Rattus norvegicus


Alignment Length:255 Identity:104/255 - (40%)
Similarity:127/255 - (49%) Gaps:64/255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNYYSHKVFDRRKLRRCTISDSNSC 72
            :|:|..|..||..:.   |:|     .|.|||                                 
  Rat    67 SPLPSGLSPLTGYSS---SLG-----RVSPLP--------------------------------- 90

  Fly    73 ASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHI-------CPECGKKYST 130
                    ||..||:||.|.:...|      ::.|.|...  |.|.|.       |..|.|.|||
  Rat    91 --------SSDTSSKDHSGSESPIS------DEEERLQPK--LSDPHAIEAEKFQCNLCNKTYST 139

  Fly   131 SSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHI 195
            .|.||:|:|.|.....:|:..|.||:|.|||:.|..||:|||...|.|:.|||.|||||||||||
  Rat   140 FSGLAKHKQLHCDAQARKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHI 204

  Fly   196 RTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSC 255
            |||||||||.|..|.:||||:||||||:||||:.|.:.|..|.|.|:..|.|:|||||.|
  Rat   205 RTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGC 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-C2H2 176..198 CDD:395048 17/21 (81%)
C2H2 Zn finger 178..198 CDD:275368 16/19 (84%)
zf-H2C2_2 191..214 CDD:463886 17/22 (77%)
zf-C2H2 204..226 CDD:395048 14/21 (67%)
C2H2 Zn finger 206..226 CDD:275368 13/19 (68%)
C2H2 Zn finger 234..250 CDD:275368 6/15 (40%)
Snai2NP_037167.1 SNAG domain. /evidence=ECO:0000250|UniProtKB:O43623 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..116 15/83 (18%)
SFP1 <86..182 CDD:227516 42/144 (29%)
C2H2 Zn finger 130..150 CDD:275370 11/19 (58%)
C2H2 Zn finger 161..181 CDD:275368 11/19 (58%)
C2H2 Zn finger 187..207 CDD:275368 16/19 (84%)
zf-H2C2_2 200..223 CDD:463886 17/22 (77%)
zf-C2H2 213..235 CDD:395048 14/21 (67%)
C2H2 Zn finger 215..235 CDD:275368 13/19 (68%)
zf-H2C2_2 227..252 CDD:463886 14/24 (58%)
C2H2 Zn finger 243..259 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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