DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Snai2

DIOPT Version :9

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_037167.1 Gene:Snai2 / 25554 RGDID:3722 Length:268 Species:Rattus norvegicus


Alignment Length:255 Identity:104/255 - (40%)
Similarity:127/255 - (49%) Gaps:64/255 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TPIPEELYNLTQLAEVTLSVGPLVTDEVKPLPLYASSDDDSNYYSHKVFDRRKLRRCTISDSNSC 72
            :|:|..|..||..:.   |:|     .|.|||                                 
  Rat    67 SPLPSGLSPLTGYSS---SLG-----RVSPLP--------------------------------- 90

  Fly    73 ASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHI-------CPECGKKYST 130
                    ||..||:||.|.:...|      ::.|.|...  |.|.|.       |..|.|.|||
  Rat    91 --------SSDTSSKDHSGSESPIS------DEEERLQPK--LSDPHAIEAEKFQCNLCNKTYST 139

  Fly   131 SSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLLQGHI 195
            .|.||:|:|.|.....:|:..|.||:|.|||:.|..||:|||...|.|:.|||.|||||||||||
  Rat   140 FSGLAKHKQLHCDAQARKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHI 204

  Fly   196 RTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSC 255
            |||||||||.|..|.:||||:||||||:||||:.|.:.|..|.|.|:..|.|:|||||.|
  Rat   205 RTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGC 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 12/28 (43%)
C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-C2H2 176..198 CDD:278523 17/21 (81%)
C2H2 Zn finger 178..198 CDD:275368 16/19 (84%)
zf-H2C2_2 191..214 CDD:290200 17/22 (77%)
zf-C2H2 204..226 CDD:278523 14/21 (67%)
C2H2 Zn finger 206..226 CDD:275368 13/19 (68%)
zf-H2C2_2 218..242 CDD:290200 13/23 (57%)
C2H2 Zn finger 234..250 CDD:275368 6/15 (40%)
Snai2NP_037167.1 SNAG domain. /evidence=ECO:0000250 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..116 15/83 (18%)
SFP1 <86..182 CDD:227516 42/144 (29%)
C2H2 Zn finger 130..150 CDD:275370 11/19 (58%)
C2H2 Zn finger 161..181 CDD:275368 11/19 (58%)
C2H2 Zn finger 187..207 CDD:275368 16/19 (84%)
zf-H2C2_2 200..223 CDD:404364 17/22 (77%)
zf-C2H2 213..235 CDD:395048 14/21 (67%)
C2H2 Zn finger 215..235 CDD:275368 13/19 (68%)
C2H2 Zn finger 243..259 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2462
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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