DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and Snai2

DIOPT Version :10

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:NP_035545.1 Gene:Snai2 / 20583 MGIID:1096393 Length:269 Species:Mus musculus


Alignment Length:259 Identity:109/259 - (42%)
Similarity:134/259 - (51%) Gaps:48/259 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PIPEELYN--LTQLAEVTLSVGPL---VTDEVKPLPLYASSDDDSNYYSHKVFDRRKLRRCTISD 68
            |.||.|.:  .:.:...|.|..||   :...:.||..|:||                |.|.    
Mouse    43 PKPEILTSGAYSPITVWTSSAAPLHSPLPSGLSPLTGYSSS----------------LGRV---- 87

  Fly    69 SNSCASSSSSSTSSRQSSEDHLGLQGHSSVHHHHGEQGEILNSTSLLEDEHI-------CPECGK 126
                    |...||..||:||.|.:...|      ::.|.|...  |.|.|.       |..|.|
Mouse    88 --------SPPPSSDTSSKDHSGSESPIS------DEEERLQPK--LSDPHAIEAEKFQCNLCNK 136

  Fly   127 KYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRPWLL 191
            .|||.|.||:|:|.|.....:|:..|.||:|.|||:.|..||:|||...|.|:.|||.|||||||
Mouse   137 TYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLL 201

  Fly   192 QGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEESSC 255
            |||||||||||||.|..|.:||||:||||||:||||:.|.:.|..|.|.|:..|.|:|||||.|
Mouse   202 QGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGC 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 C2H2 Zn finger 121..141 CDD:275368 11/19 (58%)
zf-C2H2 176..198 CDD:395048 17/21 (81%)
C2H2 Zn finger 178..198 CDD:275368 16/19 (84%)
zf-H2C2_2 191..214 CDD:463886 17/22 (77%)
zf-C2H2 204..226 CDD:395048 14/21 (67%)
C2H2 Zn finger 206..226 CDD:275368 13/19 (68%)
C2H2 Zn finger 234..250 CDD:275368 6/15 (40%)
Snai2NP_035545.1 SNAG domain. /evidence=ECO:0000250|UniProtKB:O43623 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..117 15/69 (22%)
SFP1 <102..183 CDD:227516 32/88 (36%)
C2H2 Zn finger 131..151 CDD:275370 11/19 (58%)
C2H2 Zn finger 162..182 CDD:275368 11/19 (58%)
C2H2 Zn finger 188..208 CDD:275368 16/19 (84%)
zf-H2C2_2 201..224 CDD:463886 17/22 (77%)
zf-C2H2 214..236 CDD:395048 14/21 (67%)
C2H2 Zn finger 216..236 CDD:275368 13/19 (68%)
zf-H2C2_2 228..253 CDD:463886 14/24 (58%)
C2H2 Zn finger 244..260 CDD:275368 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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