DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kah and scrt2

DIOPT Version :9

Sequence 1:NP_612040.1 Gene:Kah / 38072 FlyBaseID:FBgn0035144 Length:442 Species:Drosophila melanogaster
Sequence 2:XP_031760336.1 Gene:scrt2 / 100486069 XenbaseID:XB-GENE-5995512 Length:278 Species:Xenopus tropicalis


Alignment Length:284 Identity:118/284 - (41%)
Similarity:149/284 - (52%) Gaps:69/284 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 YASSDDDSNYYSHKV-FDRRKLRRCTISD----SNSCASS---SSSSTSSRQSSEDHLGLQGHSS 97
            :.|:|.:|.|..|:. |...      :||    |...|.|   ..|..:.:..|.|.|    :::
 Frog    14 FCSADSESVYGRHRTDFSTH------LSDKGYLSEYIAPSVYDGDSDGAIKVPSPDAL----YTT 68

  Fly    98 VHHHHGE-------------QGEILNSTSLLED--------------------------EHICPE 123
            ||..:|.             .|..:|..:.:.:                          .|.|.|
 Frog    69 VHSEYGAADSEPPDSPRSEITGGYINGDAAVSEGYSVDAFFITDGRSRRKVLSGGRSIQRHSCSE 133

  Fly   124 CGKKYSTSSNLARHRQTHRSIMDKKARHCPYCEKVYVSMPAYSMHVRTHNQGCECQFCGKRFSRP 188
            |||.|:|||||:||:|||||:..|.|:.||.|.||||||||.:||:.||:...:|:.|||.||||
 Frog   134 CGKSYATSSNLSRHKQTHRSLDSKLAKKCPTCGKVYVSMPAMAMHLLTHDLKHKCETCGKAFSRP 198

  Fly   189 WLLQGHIRTHTGEKPFKCGVCEKAFADKSNLRAHIQTHSNTKPHTCARCGKAFALKSYLYKHEES 253
            ||||||:|:|||||||.|..|.|||||:||||||:||||..|.:.|.||.|.|||||||.||.||
 Frog   199 WLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAFKHYKCKRCSKTFALKSYLNKHYES 263

  Fly   254 SCMKNRGGVPGSGAASGNRPPSSP 277
            :|.|            |..||.||
 Frog   264 ACFK------------GAVPPMSP 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KahNP_612040.1 zf-C2H2 119..141 CDD:278523 15/21 (71%)
C2H2 Zn finger 121..141 CDD:275368 14/19 (74%)
zf-C2H2 176..198 CDD:278523 15/21 (71%)
C2H2 Zn finger 178..198 CDD:275368 15/19 (79%)
zf-H2C2_2 191..214 CDD:290200 16/22 (73%)
zf-C2H2 204..226 CDD:278523 15/21 (71%)
C2H2 Zn finger 206..226 CDD:275368 14/19 (74%)
zf-H2C2_2 218..242 CDD:290200 14/23 (61%)
C2H2 Zn finger 234..250 CDD:275368 11/15 (73%)
scrt2XP_031760336.1 C2H2 Zn finger 131..151 CDD:275368 14/19 (74%)
C2H2 Zn finger 162..179 CDD:275371 12/16 (75%)
COG5048 186..>262 CDD:227381 53/75 (71%)
C2H2 Zn finger 188..208 CDD:275368 15/19 (79%)
C2H2 Zn finger 216..236 CDD:275368 14/19 (74%)
C2H2 Zn finger 244..260 CDD:275368 11/15 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D545011at33208
OrthoFinder 1 1.000 - - FOG0000984
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1445
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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