DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and PTC4

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_009683.1 Gene:PTC4 / 852422 SGDID:S000000329 Length:393 Species:Saccharomyces cerevisiae


Alignment Length:388 Identity:121/388 - (31%)
Similarity:168/388 - (43%) Gaps:106/388 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQTLSEPVTTK------------DTACCANASYRVGSSCMQGWRVDMEDAHT------------ 41
            |||.||.|:|.|            .|.........|||  |||:|:..||||.            
Yeast     1 MGQLLSHPLTEKTIEYNEYKNNQASTGIVPRFYNCVGS--MQGYRLTQEDAHLIRNENSVVYVRF 63

  Fly    42 --------HILSLPDDPQAAFFAVYDGHGGASVAKY--AGKH-----------------LHKFIT 79
                    ..|||      ..|||:|||||...:|:  .|:|                 |.|:|.
Yeast    64 FNPFIDKYETLSL------NVFAVFDGHGGDDCSKFLSGGRHHRDGNGSSNGNGEPNAGLIKWIA 122

  Fly    80 ---KRPEY-----RDNS------------IEVALKKAFLDFDREMLQNGSLDEQTAGCTAIVV-L 123
               :...|     .|:|            :....|.||:..|.|:.::  ....:.|.||:|. :
Yeast   123 YSFENHHYTSTTNNDSSKFKRSFNTLEGLVSQIFKDAFILQDEELYRH--FANSSCGSTAVVACI 185

  Fly   124 IRERRLYCANAGDSRAI-ACISGMVHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLALSRAL 187
            |.|..||.||.||||.| :..|..:..:|.||||....|..||..:||.|...||.|.||||||.
Yeast   186 INEESLYVANCGDSRCILSSKSNGIKTMSFDHKPQHIGELIRINDNGGTVSLGRVGGVLALSRAF 250

  Fly   188 GDFIYKK------------NLLKT------PEEQIVTAYPDV--EVLDITEDLEFVLLACDGIWD 232
            .||.:|:            |:.:.      |:|..||..|||  ..:|.::| ||::||||||||
Yeast   251 SDFQFKRGVTYPHRRTKLTNITQNLTYGTPPQEAQVTVEPDVLMHKIDYSKD-EFLVLACDGIWD 314

  Fly   233 VMSNFEVCQFVHKRIRDGMEPELICEELMNSCLSPDGHTGNVGGDNMTVILVCLLHNKSYEDL 295
            :.:|.::..|:...:..|.:.:.|..:|::..::.......||.||||.|:|.|  |:..|.|
Yeast   315 IYNNKQLIHFIKYHLVSGTKLDTIITKLLDHGIAQANSNTGVGFDNMTAIIVVL--NRKGETL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 108/344 (31%)
PTC4NP_009683.1 PP2C 82..355 CDD:395385 83/275 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13832
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1847
TreeFam 1 0.960 - -
65.880

Return to query results.
Submit another query.