DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ppm1 and PTC1

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_010278.3 Gene:PTC1 / 851558 SGDID:S000002164 Length:281 Species:Saccharomyces cerevisiae


Alignment Length:306 Identity:101/306 - (33%)
Similarity:154/306 - (50%) Gaps:52/306 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QTLSEPVTTKDTACCANASYRVG--SSCMQGWRVDMEDAHTHILSLPDDPQAAFFAVYDGHGGAS 65
            :.|..|.|..|      .:||||  .:....:|..|||.||::.:........:|||:|||.|..
Yeast     6 EILERPETPYD------ITYRVGVAENKNSKFRRTMEDVHTYVKNFASRLDWGYFAVFDGHAGIQ 64

  Fly    66 VAKYAGKHLHKFITKR---PEYRDNSIEVALKKAFLDFDREMLQNGSLDEQTAGCTAIVVLIR-- 125
            .:|:.|||||..|.:.   .|.||  :...|..:||..|.|:  |..| ...:||||.|.::|  
Yeast    65 ASKWCGKHLHTIIEQNILADETRD--VRDVLNDSFLAIDEEI--NTKL-VGNSGCTAAVCVLRWE 124

  Fly   126 ---------------ERRLYCANAGDSRAIACISGMVHALSVDHKPNDAKESKRIMASGGWVEFN 175
                           :|:||.||.||||.:...:|....|:.|||.:|..|.:|:..:||.:..:
Yeast   125 LPDSVSDDSMDLAQHQRKLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMKS 189

  Fly   176 RVNGNLALSRALGDFIYKKNLLKTPEEQIVTAYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVC 240
            ||||.||::|:|||..:         :.:|...|....::||.:.:|::|||||:|||:.:.:.|
Yeast   190 RVNGMLAVTRSLGDKFF---------DSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDAC 245

  Fly   241 QFVHKRIRDGMEPELICEELMNSCLSPDGHTGNVGGDNMTVILVCL 286
            :.    |:|..||....:.|:...|. :|.|     ||:||::|.|
Yeast   246 EL----IKDITEPNEAAKVLVRYALE-NGTT-----DNVTVMVVFL 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 96/285 (34%)
PTC1NP_010278.3 PP2Cc 12..279 CDD:214625 97/296 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2442
OMA 1 1.010 - - QHG53745
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.800

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