DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and PPM1D

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_003611.1 Gene:PPM1D / 8493 HGNCID:9277 Length:605 Species:Homo sapiens


Alignment Length:357 Identity:99/357 - (27%)
Similarity:150/357 - (42%) Gaps:97/357 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QTLSEPVTTKDTACCANASYRVGSSCMQGWRVDMEDAHTHILSLPD---DP----------QAAF 54
            ::||:|:..:.:.    |:...|....:|..|...:|..   .|||   .|          ..||
Human    43 RSLSQPLPPRPSP----AALPGGEVSGKGPAVAAREARD---PLPDAGASPAPSRCCRRRSSVAF 100

  Fly    55 FAVYDGHGGASVAKYAGKHLHKFITKRPEYRDN---SIEVALKKAFLDFDREMLQNGSLDE---- 112
            |||.|||||...|::|.:||..||.|:..:..:   .:..|::|.||.....|.:  .|.|    
Human   101 FAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWK--KLAEWPKT 163

  Fly   113 -----QTAGCTAIVVLIRERRLYCANAGDSRAIACI-----SGMVHALSV--DHKPNDAKESKRI 165
                 .|:|.||.||:||..::|.|:.|||..:..|     ...|.|:.|  ||||...||.:||
Human   164 MTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERI 228

  Fly   166 MASGGWV----EFNRV---------NGN------------LALSRALGDF----IYKKNLLKTPE 201
            ...||.|    ..|||         ||.            ||::|||||.    .:....:.:||
Human   229 EGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLWSYDFFSGEFVVSPE 293

  Fly   202 EQIVTAYPD--VEVLDITEDLEFVLLACDGIWDVM---SNFEVCQFVHKRIRDGMEPELICEELM 261
                   ||  |..|| .:..::::|..||:|:::   ....:||       |..|.:.:..|..
Human   294 -------PDTSVHTLD-PQKHKYIILGSDGLWNMIPPQDAISMCQ-------DQEEKKYLMGEHG 343

  Fly   262 NSC--LSPDGHTGN-----VGGDNMTVILVCL 286
            .||  :..:...|.     :..||.:.|::|:
Human   344 QSCAKMLVNRALGRWRQRMLRADNTSAIVICI 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 94/336 (28%)
PPM1DNP_003611.1 Interaction with CHEK1. /evidence=ECO:0000269|PubMed:15870257 1..101 13/64 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..90 12/53 (23%)
PP2C 67..368 CDD:278884 91/320 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.