DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and ppm1nb

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001096587.1 Gene:ppm1nb / 564875 ZFINID:ZDB-GENE-071004-34 Length:435 Species:Danio rerio


Alignment Length:331 Identity:115/331 - (34%)
Similarity:171/331 - (51%) Gaps:50/331 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSEPVTTKD-TACCANASYRVGSSCMQGWRVDMEDAHTHILSLPDD-PQAAFFAVYDGHGGASVA 67
            |..||..|. ...||:.......:.|||||..|||.|.....|..: ...|||||:|||.|::||
Zfish    59 LDRPVLDKHMQEGCASWGLTYALASMQGWRAHMEDFHNCFPQLGGELSHWAFFAVFDGHAGSAVA 123

  Fly    68 KYAGKHLHKFITKRPEYR-DNSIE---VALKKAFLDFD--------REMLQNGSLDEQTAGCTAI 120
            :...::|...|....:.| |..:|   ...|:.|...|        ||..:.|       |.|.:
Zfish   124 QNCSRNLLDHILGTGKIRADEDVERVTEGFKEGFFLMDKHLHAMACREGWERG-------GTTVV 181

  Fly   121 VVLIRERRLYCANAGDSRAIACISGMVHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLALSR 185
            ...|....:|..|.|||||:.|.:|.|...:.||||....|.:||.::||.|...||||:||:||
Zfish   182 STAITPHHIYFVNCGDSRAVLCRAGRVAFSTEDHKPFSPGEKERIESAGGSVTLQRVNGSLAVSR 246

  Fly   186 ALGDFIYKKNLLKTPEEQIVTAYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVCQFVHKRIRDG 250
            |||||.||....::..||:|:..|:|.|::.:...||::|||||:||.:||.|:|.|||.|:|..
Zfish   247 ALGDFSYKTVEWRSVTEQMVSPEPEVSVVERSPADEFLVLACDGVWDTVSNEELCAFVHSRLRIC 311

  Fly   251 MEPELICEELMNSCLSPDGHTGNVGGDNMTVILVCL----------LHNKS-------------Y 292
            .:...:|.::::.||    :.|::  ||:::||||.          ||:::             :
Zfish   312 TDLREVCSQVIDLCL----YKGSL--DNISIILVCFPGAPQLSPEALHHEAELEDFLESKVAEIF 370

  Fly   293 EDLAVR 298
            |:|::|
Zfish   371 EELSMR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 103/276 (37%)
ppm1nbNP_001096587.1 PP2Cc 79..341 CDD:238083 103/274 (38%)
PP2C_C 335..412 CDD:285117 9/42 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577927
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D262211at33208
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.