DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and ppm1na

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_998046.1 Gene:ppm1na / 405817 ZFINID:ZDB-GENE-040426-2731 Length:424 Species:Danio rerio


Alignment Length:292 Identity:111/292 - (38%)
Similarity:168/292 - (57%) Gaps:21/292 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSEPVTTKDTA---CCANASYRVGSSCMQGWRVDMEDAHTHILSLPDD-PQAAFFAVYDGHGGAS 65
            |..|:..||:|   .....:|.:.|  |||||..|||:||.:..:.|. |..::|||||||.|.:
Zfish    47 LERPILAKDSAEGESKWGITYAMAS--MQGWRAQMEDSHTCMPEMSDALPDWSYFAVYDGHAGRT 109

  Fly    66 VAKYAGKHLHKFITK----RPEYRDNSIEVALKKAFLDFDREM---LQNGSLDEQTAGCTAIVVL 123
            ||:|:.:||..||..    ..|.....::..:::.||..||.|   .:|.|.|.  :|.||..|:
Zfish   110 VAQYSSRHLLDFILDTGCVTVEEDVEQVKDGIREGFLAIDRHMHTLSRNESWDH--SGSTAASVM 172

  Fly   124 IRERRLYCANAGDSRAIACISGMVHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLALSRALG 188
            |..|..|..|.||||...|..|.|...:.||||.:.:|.:||..:||.|...|:||:||:|||||
Zfish   173 ISPRNFYFINCGDSRTFLCRDGHVVFYTEDHKPCNPREKERIQNAGGSVTLQRINGSLAVSRALG 237

  Fly   189 DFIYKKNLLKTPEEQIVTAYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVCQFVHKRIRDGMEP 253
            ||.:|:...:...||:|:..|:|..|:.:.:.||:::||||:||.:.|.::|.||..|:....:.
Zfish   238 DFDFKEVEWRAQTEQLVSPEPEVYELERSPEDEFLVVACDGVWDAIGNEDLCAFVRNRLHVCDDL 302

  Fly   254 ELICEELMNSCLSPDGHTGNVGGDNMTVILVC 285
            ..||.::::.||    :.|::  ||||:|::|
Zfish   303 REICSQVIDLCL----YKGSL--DNMTIIIIC 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 106/272 (39%)
ppm1naNP_998046.1 PP2Cc 67..329 CDD:238083 106/272 (39%)
PP2C_C 323..400 CDD:285117 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577928
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53745
OrthoDB 1 1.010 - - D262211at33208
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.690

Return to query results.
Submit another query.