DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and ptc3

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_593087.1 Gene:ptc3 / 2542008 PomBaseID:SPAC2G11.07c Length:414 Species:Schizosaccharomyces pombe


Alignment Length:383 Identity:170/383 - (44%)
Similarity:224/383 - (58%) Gaps:37/383 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQTLSEPVTTKDTACCANASYRVGSSCMQGWRVDMEDAHTHILSLP----DDPQAAFFAVYDGH 61
            ||||||||||.|.:...:|.....|.|.|||||:.|||||:.|||:.    .|| ..||||||||
pombe     1 MGQTLSEPVTEKHSVNGSNEFVLYGLSSMQGWRISMEDAHSAILSMECSAVKDP-VDFFAVYDGH 64

  Fly    62 GGASVAKYAGKHLHKFITKRPEYRDNSIEVALKKAFLDFDREMLQNGSLDEQTAGCTAIVVLIRE 126
            ||..|||:.|.:|.:.:.|.|:::......|||.:||:.|:.:|.:.......:||||.|||...
pombe    65 GGDKVAKWCGSNLPQILEKNPDFQKGDFVNALKSSFLNADKAILDDDQFHTDPSGCTATVVLRVG 129

  Fly   127 RRLYCANAGDSRAIACISGMVHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLALSRALGDFI 191
            .:||||||||||.:....|:...||.||||::..|..||.|:||:|:|.|||||||||||:|||.
pombe   130 NKLYCANAGDSRTVLGSKGIAKPLSADHKPSNEAEKARICAAGGFVDFGRVNGNLALSRAIGDFE 194

  Fly   192 YKKNLLKTPEEQIVTAYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVCQFVHKRIRDGMEPELI 256
            :|.:.|: ||:|||||.|||.|.:||:|.|||:||||||||..::.:|.:||.:.|..|...|.|
pombe   195 FKNSNLE-PEKQIVTALPDVVVHEITDDDEFVVLACDGIWDCKTSQQVIEFVRRGIVAGTSLEKI 258

  Fly   257 CEELMNSCLSPDGHTGNVGGDNMTVILVCLL--HNKS--YEDLAVRCG---GKRKTP--VETVGD 312
            .|.||::|::.|..|..:|.|||||.:|.||  ::||  |:.:|.|..   |....|  .|..|.
pombe   259 AENLMDNCIASDTETTGLGCDNMTVCIVALLQENDKSAWYKKIADRVAANDGPCAPPEYAENHGP 323

  Fly   313 ---IQDQSVKVVTPCS------QGSSG-------------SSTSRLGLGFGLRESETP 348
               ..|.:.||:.|.:      .||.|             |:...|..||..:|...|
pombe   324 GWRSGDNNKKVIVPPNFHQVKLNGSDGYDKDANENSKEDDSTNGSLAAGFRWKEHFFP 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 134/267 (50%)
ptc3NP_593087.1 PP2C 24..275 CDD:278884 127/252 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 238 1.000 Domainoid score I468
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H122156
Inparanoid 1 1.050 277 1.000 Inparanoid score I683
OMA 1 1.010 - - QHG53745
OrthoFinder 1 1.000 - - FOG0000692
OrthoInspector 1 1.000 - - mtm9303
orthoMCL 1 0.900 - - OOG6_100270
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 1 1.000 - - X1847
TreeFam 1 0.960 - -
1312.760

Return to query results.
Submit another query.