DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and ilkp-1

DIOPT Version :10

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_496370.2 Gene:ilkp-1 / 185220 WormBaseID:WBGene00009354 Length:322 Species:Caenorhabditis elegans


Alignment Length:320 Identity:88/320 - (27%)
Similarity:146/320 - (45%) Gaps:84/320 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CANASYRVGSSCMQGWRVDMEDAHTHILSLPDD--------PQAAFFAVYDGHGGASVAKYAGKH 73
            |..|:|    .|.:|.|.||:|  |||:....|        .:|:|||::|||.|...|::....
 Worm    31 CTLAAY----GCRKGERADMQD--THIMLPKFDLGTEKSFLSRASFFAIFDGHAGPRAAEHCQSQ 89

  Fly    74 LHKFI-TKRPEYRD-NSIEVALKKAFLDFDREMLQNG--SLDEQTA-----GCTAIVVLIRERRL 129
            :.|.: .|..::.| .::..:||:.|.: ..:.:.:|  ::.:|..     |.||..::|....:
 Worm    90 MGKTVKEKLAKFSDFPTLTKSLKQTFTE-SYKAVDDGFLAIAKQNKPIWKDGTTATTMIILNNVI 153

  Fly   130 YCANAGDSRAI------------ACISGMVHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLA 182
            |.||.|||||:            .|       |:|||.|....|..||..:|..|:..|:||.:.
 Worm   154 YVANIGDSRAVVARKKEDGSFAPVC-------LTVDHDPMSHDERMRIQKAGAVVKDGRINGVIE 211

  Fly   183 LSRALGDFIYKK-NLLKTPEEQIVTAYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVCQFVHKR 246
            :||::||..:|. .::.|         ||::.|.:|::..|.::||||:|...||.|...|..::
 Worm   212 VSRSIGDLPFKSLGIIST---------PDLKKLTLTKNDLFAIIACDGLWKSFSNLEAVSFAVEQ 267

  Fly   247 I---------------RDGMEPELICEEL-----MNSCLSPDGHTGNVGGDNMTVILVCL 286
            :               |:..|..::.|:|     ...|           |||::||:|.|
 Worm   268 LEAAKKTDIEQEPNESREAAELRVVAEKLAAEAVRRKC-----------GDNVSVIIVKL 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 85/313 (27%)
ilkp-1NP_496370.2 PP2Cc 34..316 CDD:238083 86/315 (27%)

Return to query results.
Submit another query.