DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ppm1 and pdp-1

DIOPT Version :9

Sequence 1:NP_612039.1 Gene:Ppm1 / 38071 FlyBaseID:FBgn0035143 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_491357.1 Gene:pdp-1 / 172035 WormBaseID:WBGene00022832 Length:451 Species:Caenorhabditis elegans


Alignment Length:423 Identity:92/423 - (21%)
Similarity:148/423 - (34%) Gaps:156/423 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 NASYRVGSSCMQGWRVDMEDAHTHILSLPDDPQAAFFAVYDGHGG----------------ASVA 67
            :|..|| .:|.......:||.::....|  ..:|..|.|:|||||                |||.
 Worm    37 DAIMRV-DTCQLAANNPIEDFYSAAKCL--SSRAFLFGVFDGHGGQQCSRHISTNLYPYLCASVL 98

  Fly    68 K---------------------------YAGK---HL---HKFITKRPEYRDNSIEVALKKAFLD 99
            |                           :.|:   |:   ||...|.......::..|||.||..
 Worm    99 KKHEVVDYPSDQRLEWLFSSSDGHLPNAFKGRETQHIAEYHKQFKKNANAYTGTVREALKLAFET 163

  Fly   100 FDREMLQN------GSLDEQTA-----GCTAIVVLIRERRLYCANAGDSRAIA------------ 141
            .|:::.:|      |.:|...|     |....:..||.|.|:.||.||:.|:.            
 Worm   164 CDKDLAENALPSAKGVIDRHAAMVAASGSCCTLAHIRSRHLHVANLGDAAAVLGVVNPNGSVTAR 228

  Fly   142 ------CISGM--VHALSVDHKPNDAKESKRIMASGGWVEFNRVNGNLALSRALGDFIYK----- 193
                  |:...  ||.:.:.|   .|.||:.::..|      |:.|.|...||.||..||     
 Worm   229 QLSRAHCVDNADEVHRIRIAH---PASESQTVLRGG------RLLGELFPLRAFGDVRYKWPLDL 284

  Fly   194 -KNLLK----TPEEQIVT-----AYPDVEVLDITEDLEFVLLACDGIWDVMSNFEVCQFVHKRIR 248
             |.:|:    .|.:.:.|     ..|:|....:|.:..|::||.||:|:.:....|.:.||    
 Worm   285 QKVVLEPLGHPPPQHLFTPPYLSTSPEVFYHKLTPNDRFLVLATDGLWEWLDPDTVVRLVH---- 345

  Fly   249 DGMEPELICEELMNSCLSPDGHT-GNV--------GGDNMTVILVCLLHNKSYEDLAVRCGGKRK 304
                                .|| |.:        .|.::..:         .|.|..|..|::|
 Worm   346 --------------------DHTLGTITQQPYVPKSGTSLRQV---------REQLKDRARGEQK 381

  Fly   305 T--PVETVGDIQDQSVKVVTPCSQGSSGSSTSR 335
            |  |::     ::.:..::.....|.||.:|.:
 Worm   382 TKKPID-----ENCATHIIRHALGGVSGGATKQ 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ppm1NP_612039.1 PP2Cc 22..286 CDD:238083 80/367 (22%)
pdp-1NP_491357.1 PP2Cc 43..438 CDD:238083 89/416 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.