DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hipk and Hipk3

DIOPT Version :9

Sequence 1:NP_001369036.1 Gene:Hipk / 38070 FlyBaseID:FBgn0035142 Length:1409 Species:Drosophila melanogaster
Sequence 2:XP_038961862.1 Gene:Hipk3 / 83617 RGDID:619884 Length:1213 Species:Rattus norvegicus


Alignment Length:1252 Identity:480/1252 - (38%)
Similarity:624/1252 - (49%) Gaps:293/1252 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 ATSGGHANTQPPSKRSSSGADGDYQLVQHEVLYSLSAEYEVLEFLGRGTFGQVVKCWKRGTSEIV 218
            ||:|        ||::.:..:|||||||||||.|:...||||:||||||||||||||||||:|||
  Rat   167 ATTG--------SKQNCTSGEGDYQLVQHEVLCSVKNTYEVLDFLGRGTFGQVVKCWKRGTNEIV 223

  Fly   219 AIKILKNHPSYARQGQIEVSILSRLSQENADEFNFVRAFECFQHKNHTCLVFEMLEQNLYDFLKQ 283
            ||||||||||||||||||||||:|||.|||||:|||||:|||||:||||||||||||||||||||
  Rat   224 AIKILKNHPSYARQGQIEVSILARLSTENADEYNFVRAYECFQHRNHTCLVFEMLEQNLYDFLKQ 288

  Fly   284 NKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 348
            |||||||||.|||:|:||.|||.|||.||||||||||||||||||||||||||||||||||||||
  Rat   289 NKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 353

  Fly   349 TVCNTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVVAELFLGWPLYPGSSEFDQIRYISQTQGLP 413
            |||:|||||||||||||||||||||||||||||||:||||||||||||:.|:|||||||||||||
  Rat   354 TVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGALEYDQIRYISQTQGLP 418

  Fly   414 TEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSKEARKYIFNCLDDIGQVNVPTDL 478
            .|.:||..:|:::||.|:.|.::..|||||.|||||||..|||||||||||.||||..||...||
  Rat   419 GEQLLNVGTKSTRFFCRETDMSHSGWRLKTLEEHEAETGMKSKEARKYIFNSLDDIVHVNTVMDL 483

  Fly   479 EGGQLLAEKTDRREFIDLLKRMLTIDQERRLTPAEALNHSFTRLTHLVDYVYCNNVKASVQMMEV 543
            ||..|||||.|||||:.|||:||.||.:.|:||.|.|||.|..:.||:|:.:.::||:...:|::
  Rat   484 EGSDLLAEKADRREFVSLLKKMLLIDADLRITPIETLNHPFVSMKHLLDFPHSSHVKSCFHIMDI 548

  Fly   544 CR---------RGDFHTVQPAST-----LVTNFVPSSTENMTFTINNQ-LTSQVQRLVRDGRPLA 593
            |:         ......::|.::     |..||....      |:.:| ||:....:|..|.|| 
  Rat   549 CKSPSSCETNNHSKMSLLRPVASNGTAALAANFTKVG------TLRSQALTTSAHSVVHHGIPL- 606

  Fly   594 YEGLYQIYNGRSVARQYPQTRTDSFQHQLVSNILCPPSYQTMPS----PTKHVV-----VGSATM 649
            ..|..|...|            |:| ||.:  |:|||:.|.:|:    ||.:.:     |...|.
  Rat   607 QAGTAQFGCG------------DAF-HQTL--IICPPAIQGIPAAHGKPTSYSIRVDNTVPLVTQ 656

  Fly   650 QP---PLQVPPQQYVNVPVPVSMVEPTSGQRMLLTNRVQASGVAWPQT--GR-QMALVPSWPQ-- 706
            .|   |||:.|                              ||...||  || |..|:|:|.|  
  Rat   657 APAVQPLQIRP------------------------------GVLSQQTWSGRTQQMLIPAWQQVT 691

  Fly   707 -QAPAHSLIVD-----STPLFNVEEIYP-KHHLN------LPRNDLKKESPAHHIAKGNSYRV-- 756
             .|||.:.:..     |..|.:..::.| .:|.|      |..|.:...:| ..|:.|.::.|  
  Rat   692 PMAPAAATLTSEGMAGSQRLGDWGKMIPHSNHYNSVMPPPLLTNQITLSAP-QPISVGIAHVVWP 755

  Fly   757 -PRHEKKEHQ-QLSPVKKRVKESSPPHQQ----RYQRAAHVSPQYHAHHNCNYGNGSGYSASAGS 815
             |...||... |...:..::.|..|..::    |:..:.         .|.|             
  Rat   756 QPATTKKNKLCQNRGILVKLMEWEPGREEINAFRWSNSL---------QNTN------------- 798

  Fly   816 VVASSAASSSNIVNGSSSSSHHHHVPVAHAQPYSSSSGHHIVSNCNANGGAGGAVVYQQPPAHAH 880
             |..||..|..|::|...    ..|.....|...:|.|.  ...|                   |
  Rat   799 -VPHSAFISPKIISGKEV----EEVSCVETQDNHTSEGE--ARTC-------------------H 837

  Fly   881 QQHGQQPHPQSSQHPQHVKQPTITIHDTPSP-TAVITI-SDSEDEGGEAGGAQVPVLKQ-RAHAQ 942
            :...:|....|.:..|     ||.|.|:||| .:|||| ||::||    ..:..|.|:: :....
  Rat   838 EASVRQDSSVSDKQRQ-----TIIIADSPSPAVSVITISSDTDDE----ETSPRPSLRECKGSLD 893

  Fly   943 SQTSGSLLQ-------HAPSSSCSRSSAHQQPHPHPQQQQQQQINYGDHDPEDARRRHHAAAAAA 1000
            .:...|.|.       .:|.|:.|.||:.|. .|.|.::..   :..|.:.|       :.....
  Rat   894 CEACQSTLNIDRMCSLSSPDSTLSTSSSGQS-SPSPCKRPN---SMSDDEQE-------SGCETV 947

  Fly  1001 VGSPKHHHHQQQQQPAPPPQQQQQQYQPQPPPQQVL----PQPQPSIKYEP--GQSQKKRILA-M 1058
            .|||.   .......:|..:....:..||.|.....    .:|..|...||  |..:...:.| |
  Rat   948 DGSPT---SDSSGHDSPFAESSFVEDTPQNPELGTCAGTEAKPALSTAVEPPVGTERGLNVDAHM 1009

  Fly  1059 AQSECGYQPQVP--------SQPSSSASLPHIPTKQEPAEFYPEYA-AAPPQQLDTKRSSWAPTS 1114
            |.::...||...        :|||:||:....||    :.|..::. .:..|...|....|    
  Rat  1010 ANTDSTCQPLTKGQPAPGKLNQPSASAARQQKPT----SAFQQQHLNLSQVQHFGTGHQEW---- 1066

  Fly  1115 SGSGVSALPLAHPKREAPSVAPISYVAPSVAPPLAHSKSSSASSSSSISAATAAAAAAAAAAAAS 1179
            :|:      |.|.:::|       |:..||         :|...:.|..:....|..|..|.:|.
  Rat  1067 NGN------LGHRRQQA-------YIPTSV---------TSNPFTLSHGSPNHTAVHAHLAGSAH 1109

  Fly  1180 VGPPSWGPPQVYRQPSQPPPGSVGLPGSTQPPPSSVAPHPHHHSHGHHHHQAGTPLGGSPSSTAA 1244
            :|    |.|.:.     |.|.|..|        ||.||..|              |..||.:  :
  Rat  1110 LG----GQPTLL-----PYPPSTAL--------SSAAPVAH--------------LLASPCT--S 1141

  Fly  1245 AALLQPDIY----AQGDIYRRPTVFVSQAAPSYAYANRAVVAPPPAHNSSSRQVIPSHPLPAHIQ 1305
            ..:||...|    ..|.:::.|.....:..||           |..|.:..:.:.|.|   ::|.
  Rat  1142 RPMLQHPTYNISHPSGIVHQVPVGINPRLLPS-----------PTIHQTQYKPIFPPH---SYIA 1192

  Fly  1306 IPTQYSQFGPLSPAQVA 1322
            ....|:.| ||||.:::
  Rat  1193 ASPAYTGF-PLSPTKLS 1208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HipkNP_001369036.1 STKc_HIPK 192..520 CDD:271113 269/327 (82%)
PHA03378 <1080..1327 CDD:223065 52/248 (21%)
Hipk3XP_038961862.1 STKc_HIPK3 196..525 CDD:271131 269/328 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353902
Domainoid 1 1.000 582 1.000 Domainoid score I200
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 700 1.000 Inparanoid score I640
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D38932at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44678
orthoMCL 1 0.900 - - OOG6_103159
Panther 1 1.100 - - O PTHR24058
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X805
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.800

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