DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hipk and Hipk1

DIOPT Version :9

Sequence 1:NP_001369036.1 Gene:Hipk / 38070 FlyBaseID:FBgn0035142 Length:1409 Species:Drosophila melanogaster
Sequence 2:XP_038958716.1 Gene:Hipk1 / 365895 RGDID:1304941 Length:1216 Species:Rattus norvegicus


Alignment Length:1429 Identity:532/1429 - (37%)
Similarity:654/1429 - (45%) Gaps:432/1429 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PPKASDFVDYAVAGGGGSGFCSGL-----GAGLSVRATS----FYGDQTVTATTDG---TRHQ-- 56
            ||..|           .|.|||..     .:|..|...|    :|........|.|   :.||  
  Rat    10 PPSVS-----------SSAFCSAKKLKIEPSGWDVSGQSSNDKYYTHSKTLPATQGQASSSHQVA 63

  Fly    57 ------EQQQQQLQQQQQQHILRQPATSASTSSVAAAAT-----------------------SKR 92
                  ..|...||....:||:   .|:|.:|..||.||                       .||
  Rat    64 NFNIPAYDQGLLLQAPAVEHIV---VTAADSSGSAATATFQSSQTLTHRSNVSLLEPYQKCGLKR 125

  Fly    93 KRQTDCDCGCVDSYNS----SHGPPVQQDSSAAAGAGSVGSKAGSGPGPDGIGPISSLKTAHTKV 153
            |.:.      |||..|    ...||:...:....||.:                           
  Rat   126 KSEE------VDSNGSVQIIEEHPPLMLQNRTVVGAAA--------------------------- 157

  Fly   154 ATSGGHANTQPPSKRSSSGADGDYQLVQHEVLYSLSAEYEVLEFLGRGTFGQVVKCWKRGTSEIV 218
                  ..|...:|.|||..:|||||||||:|.|::..|||||||||||||||.|||||.|.|||
  Rat   158 ------TTTTVTTKSSSSSGEGDYQLVQHEILCSMTNSYEVLEFLGRGTFGQVAKCWKRSTKEIV 216

  Fly   219 AIKILKNHPSYARQGQIEVSILSRLSQENADEFNFVRAFECFQHKNHTCLVFEMLEQNLYDFLKQ 283
            ||||||||||||||||||||||||||.|||||:||||::||||||||||||||||||||||||||
  Rat   217 AIKILKNHPSYARQGQIEVSILSRLSSENADEYNFVRSYECFQHKNHTCLVFEMLEQNLYDFLKQ 281

  Fly   284 NKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 348
            |||||||||||||||:||.|||:|||.||||||||||||||||||||||||||||||||||||||
  Rat   282 NKFSPLPLKYIRPILQQVATALMKLKSLGLIHADLKPENIMLVDPVRQPYRVKVIDFGSASHVSK 346

  Fly   349 TVCNTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVVAELFLGWPLYPGSSEFDQIRYISQTQGLP 413
            .||:|||||||||||||||||||||||||||||||:||||||||||||:||:|||||||||||||
  Rat   347 AVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGASEYDQIRYISQTQGLP 411

  Fly   414 TEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSKEARKYIFNCLDDIGQVNVPTDL 478
            .|::|::.:||::||.||.:..||.|||||.||||.||..|||||||||||||||:.|||:.|||
  Rat   412 AEYLLSAGTKTTRFFNRDPNLGYPLWRLKTPEEHELETGIKSKEARKYIFNCLDDMAQVNMSTDL 476

  Fly   479 EGGQLLAEKTDRREFIDLLKRMLTIDQERRLTPAEALNHSFTRLTHLVDYVYCNNVKASVQMMEV 543
            ||..:||||.||||:|||||:|||||.::|:||.:.|||.|..:|||:|:.:.|:||:..|.||:
  Rat   477 EGTDMLAEKADRREYIDLLKKMLTIDADKRVTPLKTLNHQFVTMTHLLDFPHSNHVKSCFQNMEI 541

  Fly   544 CRR--GDFHTV-QPASTLVTNFVPSSTENMTFTINNQL-TSQVQRLVRDGRPLAYEGL------- 597
            |:|  ..:.|| |..|...|:..||::.|:|.:.:||| |...|.|......||....       
  Rat   542 CKRRVHMYDTVSQIKSPFTTHVAPSTSTNLTMSFSNQLSTVHNQVLSNQASVLASSSTAAAATLS 606

  Fly   598 -----YQIYNGRSVARQYPQ-----------------------TRTDSFQHQLVSNILCPPSYQT 634
                 ..:.|.:|..  ||.                       |:||.||...   |:|||::||
  Rat   607 LANSDVSLLNYQSAL--YPPSAAPVPGVAQQGVSLQPGTTQICTQTDPFQQTF---IVCPPAFQT 666

  Fly   635 -MPSPTKH-----------VVVGSATMQPPLQVP------------------PQ------QYVNV 663
             :.:.|||           .:|..|....|||:.                  ||      ||. |
  Rat   667 GLQATTKHSGFPVRMDNAVPLVPQAPAAQPLQIQSGVLTQGSCTPLMVATLHPQVATITPQYA-V 730

  Fly   664 PVPVSMVEPTSGQRMLLTNRVQASGVAWPQTGRQMALVPSWPQQAPAHSLIVDSTPLFNVEEIYP 728
            |..:|    .:..|..|..:..|...||| .|.|..|:||..||.|..:|.....|...:.|   
  Rat   731 PFTLS----CAAGRPALVEQTAAVLQAWP-GGTQQILLPSAWQQLPGVALHNSVQPTAVIPE--- 787

  Fly   729 KHHLNLPRNDLKKESPAHHIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSPPHQQRYQRAAHVSP 793
                                |.|:|           |||:..:..                    
  Rat   788 --------------------AMGSS-----------QQLADWRNA-------------------- 801

  Fly   794 QYHAHHNCNYGNGSGYSASAGSVVASSAASSSNIVNGSSSSSHHHHVPVAHAQPYSSSSGHHIVS 858
              |:|       |:.||        :.....|.:.|         ||.:|.|||.:....|    
  Rat   802 --HSH-------GNQYS--------TIMQQPSLLTN---------HVTLATAQPLNVGVAH---- 836

  Fly   859 NCNANGGAGGAVVYQQPPAHAHQQHGQQPHPQSSQ------------------------------ 893
                       ||.||..:....:..:|..|.||.                              
  Rat   837 -----------VVRQQQSSSLPSRKNKQSAPVSSTSSLEVLPSQVYSLVGSSPLRTTSSYNSLVP 890

  Fly   894 -HPQHVKQPTITIHDTPS-PTAVITI-SDSEDEGGEAGGAQVPVLKQRAHAQSQTSGSLLQHAPS 955
             ..||  || |.|.|||| |.:|||| ||:::|...........||.|::..|..:   :..:|.
  Rat   891 VQDQH--QP-IIIPDTPSPPVSVITIRSDTDEEEDNKFKPSSSSLKARSNVISYVT---VNDSPD 949

  Fly   956 SSCSRSSAHQQPHPHPQQQQQQQINYGDHDPEDARRRHHA--------AAAAAVGSPKHHHHQQQ 1012
            |..|.||      |:|.            |...|.|.:..        .||..:|:        :
  Rat   950 SDSSLSS------PYPT------------DTLSALRGNSGTLLEGPGRTAADGIGT--------R 988

  Fly  1013 QQPAPPPQQQQQQYQPQPPPQQVLPQPQPSIKYEPGQSQKKRILAMAQSECGYQPQ--------- 1068
            ....||.:.|............:|    .|.|.:|..|...:......:..||:.|         
  Rat   989 TIIVPPLKTQLGDCTGATQASGLL----SSSKTKPVASVSGQSSGCCITPTGYRAQRGGASAVQP 1049

  Fly  1069 ---VPSQPSSSASLPHIPTKQE----PAEFYPEYAAAPPQQLDTKRSSWAPTSSGSGVSALPLAH 1126
               ..:|.|||||     |.||    ||....:...||..|        ||.:...|.......|
  Rat  1050 LNLSQNQQSSSAS-----TSQERSSNPAPRRQQAFVAPLSQ--------APYAFQHGSPLHSTGH 1101

  Fly  1127 PKREAPSVAPISYVAPSVAPPLAHSKSSSASSSSSISAATAAAA------AAAAAAAASVGPPSW 1185
                 |.:||    ||:..|...|..:.:|.:|::...:|::.|      .::..|||....||.
  Rat  1102 -----PHLAP----APAHLPSQPHLYTYAAPTSAAALGSTSSIAHLFSPQGSSRHAAAYTTHPST 1157

  Fly  1186 GPPQVYRQPSQPPPGSVGLPGSTQPPPS-----SVAPHPHHHSHGHHHHQAGTP--LGGSPSST 1242
            ...||        |.|||        ||     ||||       ..:.||..|.  :|.|..||
  Rat  1158 LVHQV--------PVSVG--------PSLLTSASVAP-------AQYQHQFATQSYIGSSRGST 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HipkNP_001369036.1 STKc_HIPK 192..520 CDD:271113 274/327 (84%)
PHA03378 <1080..1327 CDD:223065 47/180 (26%)
Hipk1XP_038958716.1 STKc_HIPK1 174..528 CDD:271130 289/353 (82%)
PHA03247 <623..930 CDD:223021 90/413 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 582 1.000 Domainoid score I200
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 700 1.000 Inparanoid score I640
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D38932at33208
OrthoFinder 1 1.000 - - FOG0002956
OrthoInspector 1 1.000 - - otm44678
orthoMCL 1 0.900 - - OOG6_103159
Panther 1 1.100 - - O PTHR24058
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X805
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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