DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hipk and mbk-2

DIOPT Version :9

Sequence 1:NP_001369036.1 Gene:Hipk / 38070 FlyBaseID:FBgn0035142 Length:1409 Species:Drosophila melanogaster
Sequence 2:NP_001023207.1 Gene:mbk-2 / 178250 WormBaseID:WBGene00003150 Length:817 Species:Caenorhabditis elegans


Alignment Length:650 Identity:182/650 - (28%)
Similarity:268/650 - (41%) Gaps:169/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKTSYPPKASDFVDYAVAGGGGSGFCSG-------LG------AGLSVRATSFYGDQTVTATTDG 52
            :.:|..|...::|..:....|...|.||       ||      |.|...|:|.|.:.        
 Worm   166 INSSANPHLVNYVQTSSFDNGSYEFPSGQAQQQRRLGGSQQHLAPLQQTASSLYSNP-------- 222

  Fly    53 TRHQEQQQQQLQQQQ--------------QQHI-----------LRQPATSAS------------ 80
               |....|.|.|||              ||||           :|.|..|.:            
 Worm   223 ---QSSSSQLLGQQQAVRPNYAYQQSLPRQQHINSHQTQAFFGTVRGPTNSTNIVTPLRASKTMI 284

  Fly    81 ------TSSVAAAATSKRKRQTDCDCGCVDSYNSSHGPPVQQDSSAAAGAGSVGSKAGSGPGPDG 139
                  ..:|||.||......|....|   |.|||.|       ..:.|:||:.:::..||....
 Worm   285 DVLAPVRDTVAAQATGLPNVGTSSSNG---SSNSSSG-------VGSGGSGSLMTQSIGGPNKHL 339

  Fly   140 IGPISSLKTA------HTKV--------------ATSGGHANTQPPSKRSSSG------------ 172
            ....|:|.||      |:|:              ::|||.......:..|:||            
 Worm   340 SASHSTLNTASTHDMMHSKIPKSPSNESLSRSHTSSSGGSQGGHNSNSGSNSGFRPEDAVQTFGA 404

  Fly   173 ----------------------------------------ADGDYQLVQHEVLYSLSAEYEVLEF 197
                                                    .:|.||||.|:   .::..||||:.
 Worm   405 KLVPFEKNEIYNYTRVFFVGSHAKKQAGVIGGANNGGYDDENGSYQLVVHD---HIAYRYEVLKV 466

  Fly   198 LGRGTFGQVVKCWKRGTSEIVAIKILKNHPSYARQGQIEVSILSRLSQENAD-EFNFVRAFECFQ 261
            :|:|:||||:|.:.....:.||:|:::|...:.||...|:.||..|.::::| ..|.:...:.|.
 Worm   467 IGKGSFGQVIKAFDHKYQQYVALKLVRNEKRFHRQADEEIRILDHLRRQDSDGTHNIIHMLDYFN 531

  Fly   262 HKNHTCLVFEMLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLV 326
            .:||.|:.||:|..|||:.:|:|||....|..:|.....:|..|..|::..|||.||||||::|.
 Worm   532 FRNHKCITFELLSINLYELIKRNKFQGFSLMLVRKFAYSMLLCLDLLQKNRLIHCDLKPENVLLK 596

  Fly   327 DPVRQPYRVKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVVAELFLGW 391
            ...|.  .:|||||||:....:.: .||:|||:|||||:|||..:...||||||||::|||..|:
 Worm   597 QQGRS--GIKVIDFGSSCFDDQRI-YTYIQSRFYRAPEVILGTKYGMPIDMWSLGCILAELLTGY 658

  Fly   392 PLYPGSSEFDQIRYISQTQGLPTEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSK 456
            ||.||..|.||:..|.:..|:|....|.:|.:...|.   ....||.:...|:....:.....::
 Worm   659 PLLPGEDENDQLALIIELLGMPPPKSLETAKRARTFI---TSKGYPRYCTATSMPDGSVVLAGAR 720

  Fly   457 EARKYIFNCLDDIGQVNVPTDLEGGQLLAEKTDRREFIDLLKRMLTIDQERRLTPAEALNHSFTR 521
            ..|          |::..|..........:......|:|.|||.|..|.|.|:|||:||.|.:.|
 Worm   721 SKR----------GKMRGPPASRSWSTALKNMGDELFVDFLKRCLDWDPETRMTPAQALKHKWLR 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HipkNP_001369036.1 STKc_HIPK 192..520 CDD:271113 119/328 (36%)
PHA03378 <1080..1327 CDD:223065
mbk-2NP_001023207.1 PKc_DYRK2_3 395..774 CDD:271126 125/397 (31%)
S_TKc 461..774 CDD:214567 119/328 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R968
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.