DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hipk and Clk4

DIOPT Version :9

Sequence 1:NP_001369036.1 Gene:Hipk / 38070 FlyBaseID:FBgn0035142 Length:1409 Species:Drosophila melanogaster
Sequence 2:XP_017169732.1 Gene:Clk4 / 12750 MGIID:1098551 Length:510 Species:Mus musculus


Alignment Length:464 Identity:129/464 - (27%)
Similarity:206/464 - (44%) Gaps:115/464 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 STSSVAAAATS-KRKRQTDCDCGCVDSYNSSHGPPVQQDSSAAAGAGSVGSKAGSGPGPDGIGPI 143
            |.|||.:..:| ||||...|         :||                                 
Mouse   131 SKSSVRSRRSSPKRKRNRPC---------ASH--------------------------------- 153

  Fly   144 SSLKTAHTKVATSGGHANTQPPSKRSSSGADGDYQLVQHEVLYS---LSAEYEVLEFLGRGTFGQ 205
                .:|:|     .|..     |||.|..|.:   ..|.:..|   |.|.||:::.||.|.||:
Mouse   154 ----QSHSK-----SHRR-----KRSRSIEDDE---EGHLICQSGDVLRARYEIVDTLGEGAFGK 201

  Fly   206 VVKCWKRGTSEI-VAIKILKNHPSYARQGQIEVSILSRLSQENADE-FNFVRAFECFQHKNHTCL 268
            ||:|...|...: ||:||:||...|....:.|:.:|..|:..:.:. |..|:..|.|.|..|.|:
Mouse   202 VVECIDHGMDGLHVAVKIVKNVGRYREAARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCI 266

  Fly   269 VFEMLEQNLYDFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLV------- 326
            |||:|..:.|||:|:|.|.|..:.:||.:..|:..::..|....|.|.|||||||:.|       
Mouse   267 VFELLGLSTYDFIKENSFLPFQIDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYVVK 331

  Fly   327 --DPVRQPYR------VKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILGLPFCEAIDMWSLGCV 383
              ..:::..|      :||:|||||::..:. .:|.:.:|:|||||:||.|.:.:..|:||:||:
Mouse   332 YNSKMKRDERTLKNTDIKVVDFGSATYDDEH-HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCI 395

  Fly   384 VAELFLGWPLYPGSSEFDQIRYISQTQGLPTEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHE 448
            :.|.:||:.::......:.:..:.:..|....||:....|...|.:..:|     |     :||.
Mouse   396 LIEYYLGFTVFQTHDSKEHLAMMERILGPIPAHMIQKTRKRKYFHHNQLD-----W-----DEHS 450

  Fly   449 AE---TNTKSKEARKYIFNCLDDIGQVNVPTDLEGGQLLAEKTDRREFIDLLKRMLTIDQERRLT 510
            :.   ...:.|..::::. |.|:                    :..:..||::|||..|..||:|
Mouse   451 SAGRYVRRRCKPLKEFML-CHDE--------------------EHEKLFDLVRRMLEYDPARRIT 494

  Fly   511 PAEALNHSF 519
            ..|||.|.|
Mouse   495 LDEALQHPF 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HipkNP_001369036.1 STKc_HIPK 192..520 CDD:271113 105/348 (30%)
PHA03378 <1080..1327 CDD:223065
Clk4XP_017169732.1 PKc_CLK1_4 175..504 CDD:271115 109/361 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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