DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hipk and Clk1

DIOPT Version :9

Sequence 1:NP_001369036.1 Gene:Hipk / 38070 FlyBaseID:FBgn0035142 Length:1409 Species:Drosophila melanogaster
Sequence 2:NP_001036099.1 Gene:Clk1 / 12747 MGIID:107403 Length:483 Species:Mus musculus


Alignment Length:451 Identity:129/451 - (28%)
Similarity:215/451 - (47%) Gaps:82/451 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VDSYNSSH------------GPPVQQDSSAAAGAGSVGSKAGSGPGPDGIGPISSLKTAH-TKVA 154
            ||.|.:.:            |...|..||.::|      ::|.          ||.|:.| ::..
Mouse    73 VDEYRNDYMGYEPGHPYGEPGSRYQMHSSKSSG------RSGR----------SSYKSKHRSRHH 121

  Fly   155 TSGGHANTQPPSKRSSSGADGDYQLVQHEVLYS---LSAEYEVLEFLGRGTFGQVVKC--WKRGT 214
            ||..|::.:...::.|...:.|.:  .|.:..|   |||.||:::.||.|.||:||:|  .|.| 
Mouse   122 TSQHHSHGKSHRRKRSRSVEDDEE--GHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVG- 183

  Fly   215 SEIVAIKILKNHPSYARQGQIEVSILSRLSQENA-DEFNFVRAFECFQHKNHTCLVFEMLEQNLY 278
            ...||:||:||...|....|.|:.:|..|:..:. ..|..|:..|.|:|:.|.|:|||:|..:.|
Mouse   184 GRRVAVKIVKNVDRYCEAAQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTY 248

  Fly   279 DFLKQNKFSPLPLKYIRPILEQVLTALLKLKQLGLIHADLKPENIMLV-DPVRQPYR-------- 334
            ||:|:|.|.|..:.:||.:..|:..::..|....|.|.|||||||:.| ....:.|.        
Mouse   249 DFIKENSFLPFRMDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDYTEAYNPKMKRDER 313

  Fly   335 ------VKVIDFGSASHVSKTVCNTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVVAELFLGWPL 393
                  :||:|||||::..:. .:|.:.:|:|||||:||.|.:.:..|:||:||::.|.:||:.:
Mouse   314 TIVNPDIKVVDFGSATYDDEH-HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTV 377

  Fly   394 YPGSSEFDQIRYISQTQGLPTEHMLNSASKTSKFFYRDVDSTYPFWRLKTTEEHEAETNTKSKEA 458
            :|.....:.:..:.:..|...:||:....|...|.:..:|     |     :||.:        |
Mouse   378 FPTHDSREHLAMMERILGPLPKHMIQKTRKRRYFHHDRLD-----W-----DEHSS--------A 424

  Fly   459 RKYIFNCLDDIGQVNVPTDLEGGQLLAEKTDRREFIDLLKRMLTIDQERRLTPAEALNHSF 519
            .:|:......:.:.          :|::..:.....||:.:||..|..:|:|..|||.|.|
Mouse   425 GRYVSRRCKPLKEF----------MLSQDAEHELLFDLIGKMLEYDPAKRITLKEALKHPF 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HipkNP_001369036.1 STKc_HIPK 192..520 CDD:271113 106/346 (31%)
PHA03378 <1080..1327 CDD:223065
Clk1NP_001036099.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
Nuclear localization signal. /evidence=ECO:0000255 29..33
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..146 15/79 (19%)
PKc_CLK1_4 147..476 CDD:271115 111/359 (31%)
S_TKc 160..476 CDD:214567 106/346 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0667
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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