DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cypl and ROC4

DIOPT Version :10

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001154684.1 Gene:ROC4 / 825376 AraportID:AT3G62030 Length:313 Species:Arabidopsis thaliana


Alignment Length:143 Identity:73/143 - (51%)
Similarity:91/143 - (63%) Gaps:5/143 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 GEITVELYWKHAPNTCRNFAEL---SRRGYYNNVVFHRIIRDFMIQGGDPT-GTGRGGASIYGSE 90
            |.|.:.|:.:..|.|..||..|   .::..|....|||||:||||||||.| |.|.||.||||::
plant   162 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAK 226

  Fly    91 FADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVE 155
            |.|| :..|:|||.|||||||:||:||||||||....|.|||.||.:||:|..||::|:.:...|
plant   227 FEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQE 290

  Fly   156 TDKNDRPVDPLRI 168
            |...|.|....||
plant   291 TRAFDVPKKGCRI 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:469651 73/143 (51%)
ROC4NP_001154684.1 cyclophilin_ABH_like 149..307 CDD:238907 73/143 (51%)

Return to query results.
Submit another query.