DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cypl and ppil4

DIOPT Version :9

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001121802.1 Gene:ppil4 / 554886 ZFINID:ZDB-GENE-030131-6251 Length:454 Species:Danio rerio


Alignment Length:154 Identity:65/154 - (42%)
Similarity:90/154 - (58%) Gaps:8/154 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VTLETSMGEITVELYWKHAPNTCRNFAELSRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASI- 86
            |.|||::|:|.::||.:..|....||.:|.:..|||..:.|.:.|||:||.||||||||||.|: 
Zfish     3 VLLETTLGDIVIDLYTEERPKASLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESVF 67

  Fly    87 ---YGSE---FADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAP-TQWLDGKHTIFGRVYTG 144
               ||.:   |..|....::|...|.:||.|:|.|.:||||.||... ..:|||.||:||.|..|
Zfish    68 CKLYGDQARFFESEKMPRIKHRKKGTVSMVNNGSDQHGSQFLITTGENVDYLDGVHTVFGEVTEG 132

  Fly   145 MEVVKRIGMVETDKNDRPVDPLRI 168
            |:|:.:|.....|.:..|...:||
Zfish   133 MDVLAKINETFVDNDFIPFQDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:294131 64/153 (42%)
ppil4NP_001121802.1 cyclophilin_RRM 4..169 CDD:238902 64/153 (42%)
RRM 172..>320 CDD:223796
RRM_PPIL4 237..319 CDD:240681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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