DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cypl and Ppwd1

DIOPT Version :10

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_001099876.1 Gene:Ppwd1 / 294711 RGDID:1310204 Length:646 Species:Rattus norvegicus


Alignment Length:151 Identity:86/151 - (56%)
Similarity:104/151 - (68%) Gaps:1/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LETSMGEITVELYWKHAPNTCRNFAELSRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASIYGS 89
            :.||||:|.::|:....|.|..||...||.||||...|||||:.||||.|||||||.||.||:|.
  Rat   496 VHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGG 560

  Fly    90 EFADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMV 154
            ||.||.|..|||.....|||||:|.:|||||||||:.||.|||.|||:||||..|||||:||..|
  Rat   561 EFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNV 625

  Fly   155 ETD-KNDRPVDPLRIIKAKVE 174
            :.: |.|:|.:.:.||...|:
  Rat   626 KVNPKTDKPYEDVSIINITVK 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:469651 84/145 (58%)
Ppwd1NP_001099876.1 WD40 <89..319 CDD:441893
WD40 repeat 136..177 CDD:293791
WD40 repeat 191..219 CDD:293791
WD40 repeat 226..277 CDD:293791
WD40 repeat 283..326 CDD:293791
cyclophilin_WD40 495..643 CDD:238908 85/146 (58%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.