DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cypl and cyn-6

DIOPT Version :10

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_497257.1 Gene:cyn-6 / 175231 WormBaseID:WBGene00000882 Length:201 Species:Caenorhabditis elegans


Alignment Length:179 Identity:82/179 - (45%)
Similarity:108/179 - (60%) Gaps:14/179 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLSDPNNAGGIPDKAWQPHFVTLETS---MGEITVELYWKHAPNTCRNFAELSRR----GYYN 58
            :|:||.......:.||.    |..:|..   :|:|.:.|:.:..|.|.:||.||::|    ||..
 Worm    12 ILALSAEARGPRVTDKV----FFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVG 72

  Fly    59 NVVFHRIIRDFMIQGGDPT-GTGRGGASIYGSEFADELHGDLRHTGAGILSMANSGPDTNGSQFF 122
            : .|||:|.:|||||||.| |.|.||.||||..|.|| :..|:|.|.|.|||||:|.||||||||
 Worm    73 S-KFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDE-NFKLQHYGPGWLSMANAGEDTNGSQFF 135

  Fly   123 ITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVETDKNDRPVDPLRIIKA 171
            ||.|.|.||||||.:||::..||:||:.|........|||::.:.|..|
 Worm   136 ITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:469651 75/153 (49%)
cyn-6NP_497257.1 cyclophilin 26..185 CDD:469651 79/165 (48%)

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