DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cypl and cyn-6

DIOPT Version :9

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_497257.1 Gene:cyn-6 / 175231 WormBaseID:WBGene00000882 Length:201 Species:Caenorhabditis elegans


Alignment Length:179 Identity:82/179 - (45%)
Similarity:108/179 - (60%) Gaps:14/179 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLSLSDPNNAGGIPDKAWQPHFVTLETS---MGEITVELYWKHAPNTCRNFAELSRR----GYYN 58
            :|:||.......:.||.    |..:|..   :|:|.:.|:.:..|.|.:||.||::|    ||..
 Worm    12 ILALSAEARGPRVTDKV----FFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVG 72

  Fly    59 NVVFHRIIRDFMIQGGDPT-GTGRGGASIYGSEFADELHGDLRHTGAGILSMANSGPDTNGSQFF 122
            : .|||:|.:|||||||.| |.|.||.||||..|.|| :..|:|.|.|.|||||:|.||||||||
 Worm    73 S-KFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDE-NFKLQHYGPGWLSMANAGEDTNGSQFF 135

  Fly   123 ITLAPTQWLDGKHTIFGRVYTGMEVVKRIGMVETDKNDRPVDPLRIIKA 171
            ||.|.|.||||||.:||::..||:||:.|........|||::.:.|..|
 Worm   136 ITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANA 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:294131 75/153 (49%)
cyn-6NP_497257.1 cyclophilin 26..185 CDD:294131 79/165 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000032
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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