DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cypl and sig-7

DIOPT Version :9

Sequence 1:NP_523874.1 Gene:Cypl / 38069 FlyBaseID:FBgn0035141 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_492343.2 Gene:sig-7 / 172664 WormBaseID:WBGene00000890 Length:427 Species:Caenorhabditis elegans


Alignment Length:154 Identity:64/154 - (41%)
Similarity:94/154 - (61%) Gaps:8/154 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VTLETSMGEITVELYWKHAPNTCRNFAELSRRGYYNNVVFHRIIRDFMIQGGDPTGTGRGGASIY 87
            |.:||::|::.::|:.|..|....||.:|.::.|||...||.|.|:::.|.|||||||:||.|:|
 Worm     3 VLIETTLGDLIIDLFVKERPRCSLNFLKLCKKKYYNLNQFHSIERNYVAQTGDPTGTGKGGESVY 67

  Fly    88 -------GSEFADELHGDLRHTGAGILSMANSGPDTNGSQFFITLAPT-QWLDGKHTIFGRVYTG 144
                   |..|..|....:|||..||:|..|:|.:..||||||||... .:||.:|||||:|..|
 Worm    68 SDMYGEQGRYFEREDLPKMRHTRMGIVSFVNNGDNMLGSQFFITLGENLDYLDDQHTIFGQVTEG 132

  Fly   145 MEVVKRIGMVETDKNDRPVDPLRI 168
            :|.::::.....|.|:||...:||
 Worm   133 LETLEKLNEQLADTNNRPFKDIRI 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CyplNP_523874.1 cyclophilin 24..170 CDD:294131 63/153 (41%)
sig-7NP_492343.2 cyclophilin_RRM 4..169 CDD:238902 63/153 (41%)
RRM 128..>346 CDD:223796 9/29 (31%)
RRM_PPIL4 238..320 CDD:240681
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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